Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC022034.1-201ENST00000512867 2156 ntBASIC8.48□□□□□ -1.05
IFT140Q96RY7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
IFT140Q96RY7 AL389915.1-201ENST00000422463 466 ntBASIC8.48□□□□□ -1.05
IFT140Q96RY7 NPM1P33-201ENST00000438918 872 ntBASIC8.48□□□□□ -1.05
IFT140Q96RY7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.48□□□□□ -1.05
IFT140Q96RY7 TCEA1P1-201ENST00000449716 880 ntBASIC8.48□□□□□ -1.05
IFT140Q96RY7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 AL359715.3-201ENST00000569267 2123 ntBASIC8.48□□□□□ -1.05
IFT140Q96RY7 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
IFT140Q96RY7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.48□□□□□ -1.05
IFT140Q96RY7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
IFT140Q96RY7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 IGKV7-3-201ENST00000357453 298 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 SNORA37-201ENST00000384504 129 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 SNORA77-201ENST00000408716 125 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 TDGF1P1-201ENST00000445734 527 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 SLC25A51P1-201ENST00000468432 871 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 AC109327.1-201ENST00000471666 403 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 AC023575.1-201ENST00000580510 358 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 EIF1P5-201ENST00000585002 234 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 AL353729.2-201ENST00000605859 1249 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 MIR6853-201ENST00000619642 74 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 AC099654.2-201ENST00000433031 1980 ntBASIC8.47□□□□□ -1.05
IFT140Q96RY7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
IFT140Q96RY7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
IFT140Q96RY7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
IFT140Q96RY7 RNU1-85P-201ENST00000364127 164 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 PPIAP9-201ENST00000403866 498 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 NOP56P2-201ENST00000447491 769 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 RNA5SP464-201ENST00000516251 108 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 RNA5SP392-201ENST00000516905 112 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 AC093227.2-201ENST00000589357 285 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 AC093765.1-201ENST00000603758 881 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.46□□□□□ -1.05
IFT140Q96RY7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
IFT140Q96RY7 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.46□□□□□ -1.05
IFT140Q96RY7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
IFT140Q96RY7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.06
IFT140Q96RY7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.46□□□□□ -1.06
IFT140Q96RY7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.46□□□□□ -1.06
IFT140Q96RY7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 BMS1P19-201ENST00000433925 393 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC034236.1-201ENST00000469891 373 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC022034.3-201ENST00000471393 478 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 RPL17P2-201ENST00000491913 451 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 GAPDHP62-201ENST00000515313 990 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 NPM1P42-201ENST00000560329 862 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC005191.1-201ENST00000603950 358 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 ZNF652P1-201ENST00000442420 1309 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC097063.1-201ENST00000426714 1797 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC022164.1-201ENST00000568767 2673 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 RNA5SP28-201ENST00000363841 119 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 SNORD113.2-201ENST00000364166 89 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 RPL23AP17-201ENST00000401064 499 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AL591848.1-201ENST00000413092 322 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 GAPDHP49-201ENST00000421421 961 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 CYCSP11-201ENST00000436426 315 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 RPS29P9-201ENST00000440360 171 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms