Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC027673.1-201ENST00000456245 405 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RN7SL643P-201ENST00000471845 291 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RPL12P31-201ENST00000478433 450 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RPL7P40-201ENST00000481703 745 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RPL23AP44-201ENST00000482216 473 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC008885.2-201ENST00000509506 930 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 KHDC1P1-201ENST00000511053 508 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RNA5SP303-201ENST00000516192 130 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 Y_RNA.695-201ENST00000516715 107 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 CYCSP38-201ENST00000559840 322 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC022662.1-201ENST00000580252 331 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC005771.1-201ENST00000585581 349 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC073544.2-201ENST00000601155 540 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AP002906.1-201ENST00000603405 233 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC092653.1-201ENST00000608509 531 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC022467.1-201ENST00000614738 749 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 MIR6719-201ENST00000622428 87 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 SGO1P2-201ENST00000429458 1589 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 SALL4P7-201ENST00000555779 3120 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC105114.1-201ENST00000624795 1862 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AL359195.2-201ENST00000623657 4412 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AL132640.2-201ENST00000559968 1698 ntBASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNGAP1Q96PV0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC01963-201ENST00000562038 3148 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 RNU6-694P-201ENST00000364071 147 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 GSTA12P-201ENST00000402398 508 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AL096711.1-201ENST00000404780 554 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 RN7SKP281-201ENST00000410472 352 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC006960.1-201ENST00000419980 153 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 OR2B8P-201ENST00000432841 938 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AL354941.1-201ENST00000438600 464 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 RPL12P30-201ENST00000488389 499 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC063943.2-201ENST00000495697 534 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 OR7E99P-201ENST00000505750 922 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 VN1R82P-201ENST00000601481 356 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC006539.2-201ENST00000601729 572 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AF131215.7-201ENST00000602443 707 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC093648.1-201ENST00000623546 606 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 OR4G1P-202ENST00000641173 1788 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms