Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC023271.1-201ENST00000445936 1090 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 SDC4P-201ENST00000453285 601 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC099560.2-201ENST00000457554 255 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 ACA64.4-201ENST00000459070 127 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC084754.1-201ENST00000463466 464 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC006499.4-201ENST00000510947 694 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 GAPDHP71-201ENST00000511530 1003 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 RNA5SP230-201ENST00000517039 122 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 PCNAP4-201ENST00000532690 730 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC092121.1-201ENST00000569452 202 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 COX6CP7-201ENST00000597056 208 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC015712.7-201ENST00000615211 635 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 AC119674.1-212ENST00000641155 993 ntBASIC5.53□□□□□ -1.52
VMP1Q96GC9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VMP1Q96GC9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VMP1Q96GC9 TCP1P3-201ENST00000414406 1498 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 HSPD1P11-201ENST00000508643 1702 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 TMSB4XP2-201ENST00000335179 210 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL354890.1-201ENST00000413730 346 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 SLC20A1P1-201ENST00000413906 956 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 RPL6P29-201ENST00000414863 865 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC092570.3-201ENST00000420113 693 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 RPS3P2-201ENST00000421346 701 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL157827.1-201ENST00000447622 132 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 RPL21P6-201ENST00000479171 504 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 UBA52P3-201ENST00000491303 382 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 CDH12P2-201ENST00000504393 298 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 FABP5P6-201ENST00000510588 409 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 HMGB1P47-201ENST00000511281 589 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC114781.3-201ENST00000512083 142 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC016550.3-201ENST00000515706 767 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AP000648.1-201ENST00000529682 397 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 MTATP6P25-201ENST00000574491 261 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL031601.1-201ENST00000605702 394 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL139099.4-201ENST00000614802 114 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
VMP1Q96GC9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 AC092376.2-201ENST00000622621 4116 ntBASIC5.52□□□□□ -1.53
VMP1Q96GC9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VMP1Q96GC9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 ZNF733P-202ENST00000444809 1573 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms