Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HPS3Q969F9 SUGT1P2-201ENST00000379452 992 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 RMRPP5-201ENST00000411156 267 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 PRUNEP1-201ENST00000425846 705 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 MGAT2P2-201ENST00000427194 797 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 PA2G4P6-201ENST00000438325 1197 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.4□□□□□ -1.38
HPS3Q969F9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.4□□□□□ -1.38
HPS3Q969F9 PRELID3BP6-201ENST00000503839 571 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 HAUS1P1-201ENST00000505275 832 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 AC105384.2-201ENST00000508433 640 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC026782.2-201ENST00000510845 636 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 RN7SKP141-201ENST00000516167 338 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 IGKV2-19-201ENST00000518132 283 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.4□□□□□ -1.38
HPS3Q969F9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 AGGF1P9-201ENST00000561884 913 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC096996.1-201ENST00000563813 325 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 RN7SL753P-201ENST00000581238 290 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AP001357.1-201ENST00000586304 1053 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC091057.3-201ENST00000602684 733 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC023762.1-201ENST00000603280 584 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 AC084373.1-201ENST00000603311 235 ntBASIC6.4□□□□□ -1.38
HPS3Q969F9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.4□□□□□ -1.38
HPS3Q969F9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HPS3Q969F9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 PDZK1P1-202ENST00000425209 1350 ntBASIC6.4□□□□□ -1.39
HPS3Q969F9 AC007842.1-201ENST00000597336 2039 ntBASIC6.4□□□□□ -1.39
HPS3Q969F9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.4□□□□□ -1.39
HPS3Q969F9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.4□□□□□ -1.39
HPS3Q969F9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HPS3Q969F9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
HPS3Q969F9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.39□□□□□ -1.39
HPS3Q969F9 RNU6-468P-201ENST00000384003 109 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 RNU6-796P-201ENST00000391086 107 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.39□□□□□ -1.39
HPS3Q969F9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.39□□□□□ -1.39
HPS3Q969F9 HYALP1-201ENST00000417674 1279 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.39□□□□□ -1.39
HPS3Q969F9 PTP4A1P1-201ENST00000420539 515 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 PTP4A1P7-201ENST00000423476 514 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 Z80107.1-201ENST00000436830 412 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 TUBB4BP6-201ENST00000437576 479 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 NDUFA5P5-201ENST00000468361 342 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AL122020.1-201ENST00000472287 459 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 RPL12P24-201ENST00000474907 486 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 RPL32P33-201ENST00000487023 394 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.39□□□□□ -1.39
HPS3Q969F9 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.39□□□□□ -1.39
HPS3Q969F9 AC010376.1-201ENST00000522101 334 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AL121594.2-201ENST00000541658 472 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC125612.1-201ENST00000547580 377 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC087888.1-201ENST00000550884 1254 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.39□□□□□ -1.39
HPS3Q969F9 AL158211.1-201ENST00000566763 763 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 SNX6P1-201ENST00000601728 1224 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC093388.1-201ENST00000609166 430 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AP005431.1-201ENST00000618479 319 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AL035661.1-201ENST00000620459 1144 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 AC068787.1-201ENST00000623908 691 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.39□□□□□ -1.39
HPS3Q969F9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 AC091305.2-201ENST00000624049 1576 ntBASIC6.39□□□□□ -1.39
HPS3Q969F9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HPS3Q969F9 LINC02019-201ENST00000608605 2060 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 1702.1 ms