Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC01881-201ENST00000416103 412 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC053481.3-201ENST00000577881 843 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC006338.2-201ENST00000616864 791 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 CR381572.2-201ENST00000624852 397 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC013356.1-201ENST00000489027 564 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC006210.2-201ENST00000367074 1545 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZNF652P1-201ENST00000442420 1309 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 SNORD8-201ENST00000363915 110 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 RNU1-59P-201ENST00000364829 162 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AURKAPS2-201ENST00000454983 333 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 PARP1P2-201ENST00000556806 195 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AP005119.2-201ENST00000579735 1105 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 U1.25-201ENST00000614085 162 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 U1.34-201ENST00000618578 162 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 U1.31-201ENST00000620022 160 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ADAM24P-201ENST00000398655 2101 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ATP5A1P4-201ENST00000556888 1605 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 RPL17P50-201ENST00000396131 546 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 IGBP1P3-201ENST00000447449 1000 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 snoU13.1-201ENST00000459157 104 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 PPIAP21-201ENST00000464473 501 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC026688.1-201ENST00000520639 1168 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC021483.2-201ENST00000567415 758 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC104118.1-201ENST00000607625 1589 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ATP5A1P1-201ENST00000454088 1321 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC025750.1-201ENST00000399891 379 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AL354714.3-201ENST00000447284 493 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 SCARNA20.4-201ENST00000516969 131 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 AL049840.6-202ENST00000603373 279 ntBASIC3.48□□□□□ -1.85
ALMS1Q8TCU4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms