Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RPS23P2-201ENST00000463671 415 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RPL32P33-201ENST00000487023 394 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RNU6-491P-201ENST00000516099 110 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RNU6-513P-201ENST00000516104 104 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC027369.2-201ENST00000528030 440 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC027281.1-201ENST00000574178 758 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RN7SL339P-201ENST00000580597 296 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC004908.3-201ENST00000610248 625 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 Z95327.3-201ENST00000610385 572 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC018926.1-201ENST00000616335 435 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 TMEM30CP-203ENST00000637814 1035 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC090220.1-201ENST00000593078 1699 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC104260.2-201ENST00000623551 3497 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL360270.2-201ENST00000562952 5985 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC068870.1-201ENST00000563737 2455 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AL132656.3-201ENST00000606384 1595 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AL159987.1-201ENST00000347911 293 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RNU6-650P-201ENST00000365658 111 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AL353625.1-202ENST00000366273 571 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RNU6-1000P-201ENST00000391066 106 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RPS3AP25-201ENST00000411660 793 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 HYALP1-201ENST00000417674 1279 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MARK2P12-201ENST00000420129 585 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ARAFP1-201ENST00000422172 605 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MTCO2P1-201ENST00000424648 477 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RNF19BPX-201ENST00000426224 625 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC114973.1-201ENST00000429057 632 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MTND2P2-201ENST00000434633 945 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 CLNS1AP1-201ENST00000435954 682 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC110602.1-201ENST00000437414 318 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC007000.2-201ENST00000442564 487 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RPSAP37-201ENST00000470913 821 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC073610.1-201ENST00000489971 396 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 UBE2V1P12-201ENST00000503954 474 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC098862.1-201ENST00000504991 413 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC122718.2-201ENST00000505325 591 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 PCNAP1-201ENST00000505363 709 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 RNU6-889P-201ENST00000517189 103 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC021678.3-201ENST00000517893 476 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC011853.1-201ENST00000518911 454 ntBASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP4Q8N3C7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms