Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC091849.1-201ENST00000509920 121 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 Y_RNA.682-201ENST00000516457 100 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 IGLV10-67-201ENST00000519446 325 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VARS2Q5ST30 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 DNM1P33-201ENST00000565222 270 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 MIR3680-2-201ENST00000578247 87 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 MIR3680-1-201ENST00000581433 87 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 U1.22-201ENST00000605806 164 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC000068.3-201ENST00000607934 427 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC012488.1-201ENST00000611221 640 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC006157.1-201ENST00000611750 366 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC006840.1-201ENST00000623069 542 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC005858.3-201ENST00000624756 589 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VARS2Q5ST30 AC010615.1-201ENST00000594254 1764 ntBASIC8.45□□□□□ -1.06
VARS2Q5ST30 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VARS2Q5ST30 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VARS2Q5ST30 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VARS2Q5ST30 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
VARS2Q5ST30 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 THAP12P1-201ENST00000398672 2203 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 RN7SKP59-201ENST00000410520 314 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 RNU4-6P-201ENST00000410804 122 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 BTF3P9-201ENST00000418784 283 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 MTCO3P29-201ENST00000432119 779 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC007000.1-201ENST00000453064 794 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 AL590326.1-201ENST00000460857 334 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC011005.2-201ENST00000487324 359 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 RPL7L1P4-201ENST00000513004 707 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC023206.1-201ENST00000605824 298 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 RNVU1-19-201ENST00000613023 167 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 AC245407.2-201ENST00000614199 451 ntBASIC8.44□□□□□ -1.06
VARS2Q5ST30 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 ATM-230ENST00000640388 578 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VARS2Q5ST30 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.44□□□□□ -1.06
VARS2Q5ST30 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 PARP1P1-201ENST00000413631 3026 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms