Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 RN7SKP184-201ENST00000362348 333 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 RNA5SP273-201ENST00000362484 113 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC005522.1-201ENST00000395416 346 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC013470.3-201ENST00000420252 1194 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC046176.1-201ENST00000435260 1170 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 CBX1P5-201ENST00000475330 559 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 Y_RNA.667-201ENST00000516212 107 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 RNA5SP438-201ENST00000516561 112 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AP003033.2-201ENST00000528901 805 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 IGBP1P1-201ENST00000554337 1009 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC022884.2-201ENST00000578535 580 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC009027.1-201ENST00000604510 479 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC129778.1-202ENST00000623812 261 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC079298.2-201ENST00000623885 459 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AL591379.1-207ENST00000635982 261 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AC093775.1-201ENST00000624154 1868 ntBASIC4.75□□□□□ -1.65
CCDC58Q4VC31 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC58Q4VC31 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC005294.1-201ENST00000355509 281 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC013442.1-201ENST00000397347 228 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 RMRPP5-201ENST00000411156 267 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 OR6D1P-201ENST00000436165 939 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AL672138.1-201ENST00000450604 1015 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC092754.1-201ENST00000472975 479 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC098818.1-201ENST00000478593 252 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 MTND6P2-201ENST00000512226 524 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 SNORA70.20-201ENST00000516848 126 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC125612.1-201ENST00000547580 377 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 CYCSP38-201ENST00000559840 322 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AP005403.1-201ENST00000579720 229 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AP000769.2-201ENST00000602344 396 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC005828.7-201ENST00000607331 556 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC037198.3-201ENST00000616754 526 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC131238.1-201ENST00000617135 328 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AP001052.1-201ENST00000626421 99 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AC087565.3-203ENST00000641018 837 ntBASIC4.74□□□□□ -1.65
CCDC58Q4VC31 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms