Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 IGKV3D-25-201ENST00000519599 235 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC009879.1-201ENST00000520029 839 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.47□□□□□ -1.69
USF2Q15853 AC090819.1-201ENST00000523800 1111 ntBASIC4.47□□□□□ -1.69
USF2Q15853 OR8X1P-201ENST00000534542 869 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 AC024940.3-201ENST00000538551 316 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.47□□□□□ -1.69
USF2Q15853 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.47□□□□□ -1.69
USF2Q15853 NMNAT1P5-201ENST00000559657 841 ntBASIC4.47□□□□□ -1.69
USF2Q15853 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 OR1E3-201ENST00000575608 948 ntBASIC4.47□□□□□ -1.69
USF2Q15853 MIR4271-201ENST00000582451 67 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC005244.1-201ENST00000582566 339 ntBASIC4.47□□□□□ -1.69
USF2Q15853 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.47□□□□□ -1.69
USF2Q15853 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.47□□□□□ -1.69
USF2Q15853 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.47□□□□□ -1.69
USF2Q15853 AC124916.2-201ENST00000604416 224 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 SNORA35B-201ENST00000607417 129 ntBASIC4.47□□□□□ -1.69
USF2Q15853 MIR6809-201ENST00000612189 116 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AP001052.1-201ENST00000626421 99 ntBASIC4.47□□□□□ -1.69
USF2Q15853 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.47□□□□□ -1.69
USF2Q15853 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USF2Q15853 AC090017.1-201ENST00000548612 1779 ntBASIC4.47□□□□□ -1.69
USF2Q15853 QRSL1P1-201ENST00000400977 1540 ntBASIC4.46□□□□□ -1.69
USF2Q15853 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USF2Q15853 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.46□□□□□ -1.69
USF2Q15853 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USF2Q15853 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USF2Q15853 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
USF2Q15853 AL138820.1-201ENST00000617901 5305 ntBASIC4.46□□□□□ -1.69
USF2Q15853 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
USF2Q15853 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AC107977.1-201ENST00000355745 939 ntBASIC4.46□□□□□ -1.7
USF2Q15853 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 RNA5SP232-201ENST00000364144 119 ntBASIC4.46□□□□□ -1.7
USF2Q15853 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USF2Q15853 ATP5F1P2-201ENST00000398143 760 ntBASIC4.46□□□□□ -1.7
USF2Q15853 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AL354890.1-201ENST00000413730 346 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC012519.1-201ENST00000424588 610 ntBASIC4.46□□□□□ -1.7
USF2Q15853 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 PNKDP1-201ENST00000435914 430 ntBASIC4.46□□□□□ -1.7
USF2Q15853 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.46□□□□□ -1.7
USF2Q15853 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AC091874.2-201ENST00000505889 720 ntBASIC4.46□□□□□ -1.7
USF2Q15853 BTG4P1-201ENST00000510421 183 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC018797.1-201ENST00000510791 255 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 VTA1P2-201ENST00000520205 911 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.46□□□□□ -1.7
USF2Q15853 DYNLL1P4-201ENST00000549314 266 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC107958.1-201ENST00000556576 290 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC091078.2-201ENST00000557145 559 ntBASIC4.46□□□□□ -1.7
USF2Q15853 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 AP005119.2-201ENST00000579735 1105 ntBASIC4.46□□□□□ -1.7
USF2Q15853 MIR4502-201ENST00000580432 81 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.46□□□□□ -1.7
USF2Q15853 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AC123786.2-201ENST00000603459 275 ntBASIC4.46□□□□□ -1.7
USF2Q15853 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.46□□□□□ -1.7
USF2Q15853 AL136131.3-201ENST00000607600 188 ntBASIC4.46□□□□□ -1.7
USF2Q15853 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 AC092266.1-201ENST00000610958 165 ntBASIC4.46□□□□□ -1.7
USF2Q15853 MIR6806-201ENST00000622141 64 ntBASIC4.46□□□□□ -1.7
USF2Q15853 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms