Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 RNA5SP394-201ENST00000364216 119 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 RNA5SP90-201ENST00000364801 99 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSBP1Q04837 HMGB1P20-201ENST00000402555 677 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 CEACAMP8-201ENST00000413902 580 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 SLC35E1P1-201ENST00000419313 864 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP1Q04837 EIF4HP2-201ENST00000424380 563 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 OTX2P1-201ENST00000450956 354 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 RN7SL517P-201ENST00000462240 305 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 RPEP1-201ENST00000504507 658 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 RN7SKP99-201ENST00000517028 307 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AP001000.1-201ENST00000526843 742 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP1Q04837 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 OR4A41P-201ENST00000533053 928 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.33□□□□□ -1.72
SSBP1Q04837 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 CYCSP38-201ENST00000559840 322 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP1Q04837 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.33□□□□□ -1.72
SSBP1Q04837 AC091167.5-201ENST00000605689 894 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 uc_338.29-201ENST00000615099 168 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AC007683.2-201ENST00000624681 714 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSBP1Q04837 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSBP1Q04837 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 AL513548.1-201ENST00000562904 1724 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AC093591.2-201ENST00000565254 3843 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP1Q04837 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 RN7SKP113-201ENST00000363891 295 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 SNORA2.3-201ENST00000383920 135 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 SNORA16A-201ENST00000384342 137 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AL592291.1-201ENST00000403830 352 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 RN7SKP86-201ENST00000410454 332 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AL139158.1-201ENST00000424719 340 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP1Q04837 RPS29P10-201ENST00000439197 166 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AL356121.1-201ENST00000442911 156 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AC104634.1-201ENST00000452720 462 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 MTCO1P55-201ENST00000489829 745 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 RN7SL568P-201ENST00000493069 298 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC106822.1-201ENST00000502647 526 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 NACAP5-201ENST00000509863 636 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC018797.1-201ENST00000510791 255 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC079905.1-201ENST00000549280 475 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP1Q04837 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 IMMP1LP1-201ENST00000605170 488 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP1Q04837 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AC111152.1-202ENST00000635848 339 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 AC135068.12-201ENST00000637370 931 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SSBP1Q04837 AC092747.4-201ENST00000620519 1861 ntBASIC4.32□□□□□ -1.72
SSBP1Q04837 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP1Q04837 AC019072.1-201ENST00000604535 1551 ntBASIC4.31□□□□□ -1.72
SSBP1Q04837 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.31□□□□□ -1.72
SSBP1Q04837 LYARP1-201ENST00000436977 1501 ntBASIC4.31□□□□□ -1.72
SSBP1Q04837 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP1Q04837 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
SSBP1Q04837 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP1Q04837 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.31□□□□□ -1.72
SSBP1Q04837 SALL4P2-201ENST00000423288 2910 ntBASIC4.31□□□□□ -1.72
SSBP1Q04837 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP1Q04837 AC008549.2-201ENST00000333482 706 ntBASIC4.31□□□□□ -1.72
SSBP1Q04837 IL6STP1-201ENST00000346911 1020 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms