Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 OR55B1P-203ENST00000641518 2602 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.77□□□□□ -1.65
H3F3AP84243 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 AC092376.2-201ENST00000622621 4116 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.77□□□□□ -1.65
H3F3AP84243 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 ABCC13-202ENST00000463099 3842 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
H3F3AP84243 TCP1P3-201ENST00000414406 1498 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AL022322.2-201ENST00000624072 20397 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.76□□□□□ -1.65
H3F3AP84243 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 RNU1-19P-201ENST00000363306 165 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
H3F3AP84243 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 HSPD1P12-201ENST00000429127 1069 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 FTLP19-201ENST00000433300 394 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 RPS11P7-201ENST00000442125 465 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 RPS12P31-201ENST00000491419 398 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
H3F3AP84243 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 AC024558.1-201ENST00000505008 528 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 RPL7L1P4-201ENST00000513004 707 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 RNU6-941P-201ENST00000516346 108 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 CDC42P3-201ENST00000518493 633 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.76□□□□□ -1.65
H3F3AP84243 AC130364.2-201ENST00000528639 604 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 AC068993.1-201ENST00000546724 589 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 NMNAT1P5-201ENST00000559657 841 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 RPL10P14-201ENST00000565265 298 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.76□□□□□ -1.65
H3F3AP84243 AL162431.4-201ENST00000604674 411 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 MTCO1P1-201ENST00000624263 1081 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.76□□□□□ -1.65
H3F3AP84243 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 PCAT14-202ENST00000627127 3935 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3F3AP84243 Z95331.1-201ENST00000623075 23112 ntBASIC4.76□□□□□ -1.65
H3F3AP84243 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
H3F3AP84243 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 AC093849.1-201ENST00000563631 2209 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC005294.1-201ENST00000355509 281 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.75□□□□□ -1.65
H3F3AP84243 RN7SKP59-201ENST00000410520 314 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.75□□□□□ -1.65
H3F3AP84243 SLC35E1P1-201ENST00000419313 864 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 MGAT2P2-201ENST00000427194 797 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 RPL7L1P9-201ENST00000431298 745 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 RPL7P40-201ENST00000481703 745 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 RPS21P4-201ENST00000487122 248 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 RPL15P21-201ENST00000495592 567 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 USP9YP2-201ENST00000504503 1000 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 USP9YP1-201ENST00000513521 1002 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 RNU6-513P-201ENST00000516104 104 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.75□□□□□ -1.65
H3F3AP84243 AL049779.2-201ENST00000553847 315 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC007225.2-201ENST00000562529 256 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.75□□□□□ -1.65
H3F3AP84243 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms