Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.84□□□□□ -1.47
TPM4P67936 AC068305.2-201ENST00000550567 1205 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 AC129915.3-201ENST00000634128 948 ntBASIC5.84□□□□□ -1.47
TPM4P67936 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TPM4P67936 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM4P67936 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
TPM4P67936 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TPM4P67936 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TPM4P67936 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 AC106872.5-201ENST00000508856 1416 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC083843.3-201ENST00000623679 2186 ntBASIC5.83□□□□□ -1.48
TPM4P67936 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM4P67936 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM4P67936 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TPM4P67936 RN7SKP292-201ENST00000365522 317 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.83□□□□□ -1.48
TPM4P67936 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.83□□□□□ -1.48
TPM4P67936 KCTD9P1-201ENST00000430462 1167 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.83□□□□□ -1.48
TPM4P67936 RPS11P7-201ENST00000442125 465 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC105399.1-202ENST00000447303 205 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM4P67936 AC118758.1-202ENST00000454719 225 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC091180.1-201ENST00000462104 372 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AL591473.1-201ENST00000464297 313 ntBASIC5.83□□□□□ -1.48
TPM4P67936 RN7SL612P-201ENST00000497704 295 ntBASIC5.83□□□□□ -1.48
TPM4P67936 HMGB3P16-201ENST00000508037 287 ntBASIC5.83□□□□□ -1.48
TPM4P67936 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.83□□□□□ -1.48
TPM4P67936 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 AC060775.1-201ENST00000518241 520 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC078878.1-201ENST00000539832 958 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC006512.2-201ENST00000543250 486 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AL390334.1-201ENST00000556395 450 ntBASIC5.83□□□□□ -1.48
TPM4P67936 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TPM4P67936 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM4P67936 AC015914.2-201ENST00000618167 288 ntBASIC5.83□□□□□ -1.48
TPM4P67936 MIR6806-201ENST00000622141 64 ntBASIC5.83□□□□□ -1.48
TPM4P67936 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM4P67936 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM4P67936 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.83□□□□□ -1.48
TPM4P67936 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.83□□□□□ -1.48
TPM4P67936 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM4P67936 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TPM4P67936 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.82□□□□□ -1.48
TPM4P67936 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM4P67936 OR8V1P-201ENST00000395193 873 ntBASIC5.82□□□□□ -1.48
TPM4P67936 OR5M12P-201ENST00000423388 929 ntBASIC5.82□□□□□ -1.48
TPM4P67936 AC009238.2-201ENST00000431026 355 ntBASIC5.82□□□□□ -1.48
TPM4P67936 AL035090.1-201ENST00000454835 332 ntBASIC5.82□□□□□ -1.48
TPM4P67936 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.82□□□□□ -1.48
TPM4P67936 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.82□□□□□ -1.48
TPM4P67936 YWHABP2-201ENST00000540201 713 ntBASIC5.82□□□□□ -1.48
TPM4P67936 AL049872.1-201ENST00000556323 322 ntBASIC5.82□□□□□ -1.48
TPM4P67936 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM4P67936 RNU6-84P-201ENST00000607737 102 ntBASIC5.82□□□□□ -1.48
TPM4P67936 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM4P67936 HTR1DP1-201ENST00000616500 888 ntBASIC5.82□□□□□ -1.48
TPM4P67936 MIR6813-201ENST00000621638 56 ntBASIC5.82□□□□□ -1.48
TPM4P67936 AC015871.5-202ENST00000623252 701 ntBASIC5.82□□□□□ -1.48
TPM4P67936 AC090181.3-201ENST00000624777 1514 ntBASIC5.82□□□□□ -1.48
TPM4P67936 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM4P67936 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.81□□□□□ -1.48
TPM4P67936 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM4P67936 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM4P67936 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TPM4P67936 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 RNU1-74P-201ENST00000384108 171 ntBASIC5.81□□□□□ -1.48
TPM4P67936 MIR105-1-201ENST00000385222 81 ntBASIC5.81□□□□□ -1.48
TPM4P67936 RN7SKP16-201ENST00000410180 299 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 OR2AH1P-201ENST00000425717 928 ntBASIC5.81□□□□□ -1.48
TPM4P67936 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.81□□□□□ -1.48
TPM4P67936 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.81□□□□□ -1.48
TPM4P67936 Z84478.1-201ENST00000438230 1219 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM4P67936 AC093166.2-201ENST00000455969 1017 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM4P67936 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TPM4P67936 BTG4P1-201ENST00000510421 183 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM4P67936 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM4P67936 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms