Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.56□□□□□ -1.36
EPHB3P54753 AP002345.2-201ENST00000609961 904 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC245014.3-201ENST00000618589 347 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC090617.9-201ENST00000623751 147 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 MTND5P24-201ENST00000438892 1767 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC111188.2-201ENST00000529697 1387 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AL137058.3-201ENST00000624531 3099 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC017002.4-201ENST00000604721 1525 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 MAPK10-344ENST00000641718 3746 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 AC013488.1-201ENST00000526618 1838 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 AP002370.1-201ENST00000528055 1602 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
EPHB3P54753 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 Y_RNA.3-201ENST00000362331 103 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 AL603865.2-201ENST00000401679 213 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 RANP4-201ENST00000413361 655 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC066692.1-201ENST00000421721 457 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 IPPKP1-201ENST00000422501 768 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 NPM1P26-201ENST00000426339 738 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 MRPS10P2-201ENST00000431226 381 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 RPS29P14-201ENST00000431518 171 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 MTCO1P43-201ENST00000431831 488 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 ARL5AP3-201ENST00000439327 386 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 EEF1A1P39-201ENST00000440791 250 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 PTENP1-201ENST00000447117 1215 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.55□□□□□ -1.36
EPHB3P54753 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 MRPL42P4-201ENST00000453267 443 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 RANP2-201ENST00000456833 229 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 SNX18P26-201ENST00000458433 740 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC005410.1-202ENST00000460347 485 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 CR383658.1-201ENST00000514609 734 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC138938.1-201ENST00000515431 782 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
EPHB3P54753 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.55□□□□□ -1.36
EPHB3P54753 AL512310.9-201ENST00000553311 948 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.55□□□□□ -1.36
EPHB3P54753 LINC00556-201ENST00000569603 412 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 EIF1P4-201ENST00000572664 335 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 AL136363.2-201ENST00000604173 851 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC006924.1-201ENST00000610750 559 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC012409.3-201ENST00000611343 981 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC024257.5-201ENST00000612739 531 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC007204.2-201ENST00000615022 616 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC022079.2-201ENST00000619739 566 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC099842.1-201ENST00000619919 596 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.55□□□□□ -1.36
EPHB3P54753 AC019072.1-201ENST00000604535 1551 ntBASIC6.55□□□□□ -1.36
EPHB3P54753 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
EPHB3P54753 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.55□□□□□ -1.36
EPHB3P54753 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
EPHB3P54753 AC006213.6-201ENST00000623722 4179 ntBASIC6.54□□□□□ -1.36
EPHB3P54753 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.54□□□□□ -1.36
EPHB3P54753 AC024651.2-201ENST00000562480 2098 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms