Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 AL591363.1-201ENST00000450091 483 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AC108751.3-201ENST00000461814 1020 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 RN7SL188P-201ENST00000469842 285 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 AC006463.2-201ENST00000473326 348 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 AC009120.1-201ENST00000493458 473 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.66□□□□□ -1.5
LIMK1P53667 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 RNU4ATAC-201ENST00000580972 127 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.66□□□□□ -1.5
LIMK1P53667 AC126915.2-201ENST00000610957 190 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
LIMK1P53667 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LIMK1P53667 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK1P53667 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 RPL23P2-201ENST00000320371 421 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AC083799.1-201ENST00000366451 910 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 MT-RNR1-201ENST00000389680 954 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 RNA5SP105-201ENST00000391123 113 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AL139039.2-201ENST00000407436 479 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 RNA5SP296-201ENST00000410523 111 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 AC007064.3-201ENST00000422608 359 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 BX276092.6-201ENST00000430476 250 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.65□□□□□ -1.5
LIMK1P53667 CEACAMP9-201ENST00000442990 513 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 NDUFA5P8-201ENST00000449019 346 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 NPM1P39-201ENST00000449818 867 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AL450023.1-201ENST00000450868 751 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.65□□□□□ -1.5
LIMK1P53667 OSTCP1-201ENST00000455507 450 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 BX276092.8-201ENST00000455722 250 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 RPL31P53-201ENST00000457065 348 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK1P53667 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.65□□□□□ -1.5
LIMK1P53667 AL671862.1-201ENST00000515851 349 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 RNU6-362P-201ENST00000516736 90 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.65□□□□□ -1.5
LIMK1P53667 IGLV3-30-201ENST00000524362 298 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK1P53667 AC124856.1-201ENST00000600819 896 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AF230666.2-201ENST00000602328 725 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AL137072.1-201ENST00000603444 466 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK1P53667 AP002799.1-201ENST00000623552 423 ntBASIC5.65□□□□□ -1.5
LIMK1P53667 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK1P53667 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.65□□□□□ -1.51
LIMK1P53667 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK1P53667 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.65□□□□□ -1.51
LIMK1P53667 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LIMK1P53667 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK1P53667 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LIMK1P53667 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
LIMK1P53667 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK1P53667 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK1P53667 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LIMK1P53667 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LIMK1P53667 RNU4-2-201ENST00000365668 141 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 AL356967.1-201ENST00000406305 431 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 RN7SKP17-201ENST00000411242 351 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC009506.2-201ENST00000420635 840 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.64□□□□□ -1.51
LIMK1P53667 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 Z80107.2-201ENST00000445127 392 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.64□□□□□ -1.51
LIMK1P53667 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK1P53667 MRE11P1-201ENST00000464884 2127 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC109462.1-201ENST00000491087 368 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC098799.1-201ENST00000504752 800 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC021678.3-201ENST00000517893 476 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK1P53667 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms