Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.21□□□□□ -1.41
SCN4AP35499 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN4AP35499 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN4AP35499 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 OR9G4-201ENST00000302957 984 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 OR4K15-201ENST00000305051 1216 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
SCN4AP35499 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN4AP35499 AC234779.1-201ENST00000425910 285 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 CRIP1P1-201ENST00000427567 185 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 KCTD10P1-201ENST00000434203 625 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN4AP35499 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN4AP35499 AC012400.1-201ENST00000518452 381 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.21□□□□□ -1.42
SCN4AP35499 AC138701.1-201ENST00000524329 714 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN4AP35499 AL109618.2-201ENST00000605527 211 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 MLECP1-201ENST00000615893 709 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCN4AP35499 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN4AP35499 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN4AP35499 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SCN4AP35499 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN4AP35499 AC083899.1-201ENST00000454465 3819 ntBASIC6.21□□□□□ -1.42
SCN4AP35499 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN4AP35499 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCN4AP35499 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SCN4AP35499 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN4AP35499 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN4AP35499 AC091180.1-201ENST00000462104 372 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 AC011005.3-201ENST00000491624 395 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 RN7SL604P-201ENST00000492589 296 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.2□□□□□ -1.42
SCN4AP35499 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN4AP35499 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
SCN4AP35499 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN4AP35499 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
SCN4AP35499 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 BX276092.6-201ENST00000430476 250 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN4AP35499 BX276092.8-201ENST00000455722 250 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN4AP35499 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN4AP35499 NMNAT1P1-201ENST00000554095 876 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 AL031658.2-201ENST00000616850 651 ntBASIC6.2□□□□□ -1.42
SCN4AP35499 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN4AP35499 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN4AP35499 AC068870.1-201ENST00000563737 2455 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SCN4AP35499 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 SNORA66-201ENST00000384792 133 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SCN4AP35499 RNU4-25P-201ENST00000410569 230 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN4AP35499 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN4AP35499 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN4AP35499 AL161722.2-201ENST00000434731 981 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AC073143.1-201ENST00000436316 395 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AL137845.2-201ENST00000444292 988 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AC079168.1-201ENST00000458741 345 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 RN7SL41P-201ENST00000476144 297 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AC083829.1-201ENST00000503756 657 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN4AP35499 BNIP3P22-201ENST00000593399 556 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AC125494.2-201ENST00000602431 657 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 AL139041.1-201ENST00000605480 610 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.19□□□□□ -1.42
SCN4AP35499 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms