Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC079841.1-201ENST00000481228 950 ntBASIC5.21□□□□□ -1.58
RORAP35398 AC008410.1-201ENST00000483777 339 ntBASIC5.21□□□□□ -1.58
RORAP35398 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.21□□□□□ -1.58
RORAP35398 AC111000.5-201ENST00000506559 1178 ntBASIC5.21□□□□□ -1.58
RORAP35398 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
RORAP35398 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.21□□□□□ -1.58
RORAP35398 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.21□□□□□ -1.58
RORAP35398 AC004825.1-201ENST00000555068 586 ntBASIC5.21□□□□□ -1.58
RORAP35398 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RORAP35398 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.21□□□□□ -1.58
RORAP35398 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.21□□□□□ -1.58
RORAP35398 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
RORAP35398 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 AL021707.7-201ENST00000607991 416 ntBASIC5.21□□□□□ -1.58
RORAP35398 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RORAP35398 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 MTND5P23-201ENST00000430812 1655 ntBASIC5.21□□□□□ -1.58
RORAP35398 AL929601.4-201ENST00000613011 1341 ntBASIC5.21□□□□□ -1.58
RORAP35398 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
RORAP35398 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RORAP35398 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
RORAP35398 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 AC083899.1-201ENST00000454465 3819 ntBASIC5.2□□□□□ -1.58
RORAP35398 AC018809.2-201ENST00000602436 3823 ntBASIC5.2□□□□□ -1.58
RORAP35398 AC144833.1-201ENST00000567953 4089 ntBASIC5.2□□□□□ -1.58
RORAP35398 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AL353796.1-201ENST00000561542 3241 ntBASIC5.2□□□□□ -1.58
RORAP35398 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AC007938.2-201ENST00000604666 2634 ntBASIC5.2□□□□□ -1.58
RORAP35398 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 AC005294.1-201ENST00000355509 281 ntBASIC5.2□□□□□ -1.58
RORAP35398 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RORAP35398 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 RNU1-19P-201ENST00000363306 165 ntBASIC5.2□□□□□ -1.58
RORAP35398 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
RORAP35398 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 MIR137-201ENST00000385223 102 ntBASIC5.2□□□□□ -1.58
RORAP35398 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 SETP10-201ENST00000424368 814 ntBASIC5.2□□□□□ -1.58
RORAP35398 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 OR52B5P-201ENST00000435337 951 ntBASIC5.2□□□□□ -1.58
RORAP35398 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 AC073072.2-201ENST00000447425 348 ntBASIC5.2□□□□□ -1.58
RORAP35398 AC239798.3-201ENST00000454459 408 ntBASIC5.2□□□□□ -1.58
RORAP35398 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.2□□□□□ -1.58
RORAP35398 AC008953.1-201ENST00000497334 318 ntBASIC5.2□□□□□ -1.58
RORAP35398 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.2□□□□□ -1.58
RORAP35398 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.2□□□□□ -1.58
RORAP35398 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AC006840.1-201ENST00000623069 542 ntBASIC5.2□□□□□ -1.58
RORAP35398 OR52B5P-202ENST00000641118 1110 ntBASIC5.2□□□□□ -1.58
RORAP35398 AC079776.5-201ENST00000641920 211 ntBASIC5.2□□□□□ -1.58
RORAP35398 AC245100.2-201ENST00000454544 1679 ntBASIC5.2□□□□□ -1.58
RORAP35398 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RORAP35398 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RORAP35398 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
RORAP35398 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RORAP35398 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RORAP35398 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
RORAP35398 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.19□□□□□ -1.58
RORAP35398 OR9K1P-202ENST00000641111 3217 ntBASIC5.19□□□□□ -1.58
RORAP35398 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.19□□□□□ -1.58
RORAP35398 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 RIMKLBP2-201ENST00000424737 654 ntBASIC5.19□□□□□ -1.58
RORAP35398 DSTNP5-201ENST00000427921 523 ntBASIC5.19□□□□□ -1.58
RORAP35398 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.19□□□□□ -1.58
RORAP35398 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 AC245047.2-201ENST00000441060 530 ntBASIC5.19□□□□□ -1.58
RORAP35398 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 EEF1B2P5-201ENST00000444820 548 ntBASIC5.19□□□□□ -1.58
RORAP35398 PSAT1P4-201ENST00000466500 526 ntBASIC5.19□□□□□ -1.58
RORAP35398 AC072052.1-201ENST00000496556 306 ntBASIC5.19□□□□□ -1.58
RORAP35398 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms