Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL049545.1-201ENST00000401856 572 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 NPM1P38-201ENST00000403835 865 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 EIF4A1P1-201ENST00000420241 934 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 SUMO2P3-201ENST00000438311 288 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AL391987.1-201ENST00000441025 200 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AL603882.1-201ENST00000463059 681 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 SLC25A51P1-201ENST00000468432 871 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AL355032.1-201ENST00000472981 438 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 GAPDHP71-201ENST00000511530 1003 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 HMGN2P36-201ENST00000529541 409 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 OR4U1P-201ENST00000554958 912 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC073387.2-201ENST00000604797 784 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 FAM72A-208ENST00000607379 1139 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 U6.48-201ENST00000618523 106 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AP002967.1-201ENST00000624203 539 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC106872.5-201ENST00000508856 1416 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 KARSP1-201ENST00000451871 1752 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC015689.2-201ENST00000528172 1738 ntBASIC6.05□□□□□ -1.44
SLC6A4P31645 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC6A4P31645 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 SNORA51.1-201ENST00000363243 140 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 RNU6-316P-201ENST00000391027 107 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC6A4P31645 UBE2V1P11-201ENST00000411559 285 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 Z68694.1-201ENST00000413929 841 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC6A4P31645 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 NENFP1-201ENST00000419476 466 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC127526.2-201ENST00000426436 775 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AL445665.1-202ENST00000452436 324 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC026414.1-201ENST00000504046 698 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 MTATP6P1-201ENST00000514057 681 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 SNORA70.20-201ENST00000516848 126 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 OR5D2P-201ENST00000524390 911 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AL049779.3-201ENST00000557141 606 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC015802.2-201ENST00000589690 189 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC6A4P31645 AL035461.2-201ENST00000619201 524 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC004232.3-201ENST00000622977 525 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC063952.1-203ENST00000634410 658 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 AC017104.5-201ENST00000637647 639 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC6A4P31645 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 MFSD8-220ENST00000641243 1422 ntBASIC6.04□□□□□ -1.44
SLC6A4P31645 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC6A4P31645 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC6A4P31645 AC007159.1-201ENST00000566529 4706 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms