Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HOXC13P31276 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 RNU1-77P-201ENST00000390868 162 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 NIPA2P1-201ENST00000426223 976 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 NPM1P18-201ENST00000434232 732 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC13P31276 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC13P31276 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 RN7SL860P-201ENST00000473738 223 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 RPS17P5-201ENST00000498293 408 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC13P31276 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC13P31276 IGLV3-24-201ENST00000517477 197 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC13P31276 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC13P31276 NRBF2P4-201ENST00000520874 850 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 MTATP6P25-201ENST00000574491 261 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC13P31276 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 AC010245.2-201ENST00000606908 1167 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AC007620.3-201ENST00000608131 497 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AC116651.1-201ENST00000609724 556 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 MIR8080-201ENST00000622224 89 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 CASC19-264ENST00000641912 1184 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC13P31276 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.84□□□□□ -1.48
HOXC13P31276 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
HOXC13P31276 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.84□□□□□ -1.48
HOXC13P31276 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC13P31276 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
HOXC13P31276 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.84□□□□□ -1.48
HOXC13P31276 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC13P31276 AP005435.3-201ENST00000531260 3198 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC007342.7-201ENST00000624610 2337 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 NXF4-202ENST00000416098 1465 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 AC107027.3-201ENST00000565095 3473 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC13P31276 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 SNORA56-201ENST00000383966 129 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC009804.1-201ENST00000400949 179 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 RNA5SP296-201ENST00000410523 111 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC245047.2-201ENST00000441060 530 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 Z80107.2-201ENST00000445127 392 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 LDHBP2-201ENST00000456969 1005 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 RPL31P53-201ENST00000457065 348 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 SNORD125-201ENST00000459538 96 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 RN7SL809P-201ENST00000482040 297 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 AK4P6-201ENST00000505168 528 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC110775.1-201ENST00000513721 462 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 AL390334.1-201ENST00000556395 450 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 MIR4311-201ENST00000580794 100 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AL512329.2-201ENST00000607350 548 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 RPSAP73-201ENST00000614820 330 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 AL391597.1-201ENST00000618707 694 ntBASIC5.83□□□□□ -1.48
HOXC13P31276 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC13P31276 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
HOXC13P31276 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC13P31276 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms