Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL8A2P25067 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 AC010266.2-201ENST00000564741 3255 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC007342.5-201ENST00000571340 2142 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC100757.1-201ENST00000616872 1835 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 SNORA17.1-201ENST00000362945 126 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 SNORA70.6-201ENST00000383934 134 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL8A2P25067 AL133482.1-201ENST00000415988 498 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.45□□□□□ -1.7
COL8A2P25067 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC006455.6-201ENST00000426192 893 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 RN7SL329P-201ENST00000467740 299 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 CBX1P5-201ENST00000475330 559 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 OR4A17P-201ENST00000526032 904 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC134349.2-201ENST00000535136 910 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC024940.3-201ENST00000538551 316 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC009962.1-201ENST00000567327 3813 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.45□□□□□ -1.7
COL8A2P25067 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.45□□□□□ -1.7
COL8A2P25067 TAS2R6P-201ENST00000605022 826 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 MIR6133-201ENST00000617057 108 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC099494.2-201ENST00000623371 978 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 LINC01739-205ENST00000641890 573 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
COL8A2P25067 AP000473.2-201ENST00000602659 1537 ntBASIC4.45□□□□□ -1.7
COL8A2P25067 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
COL8A2P25067 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL8A2P25067 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.45□□□□□ -1.7
COL8A2P25067 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL8A2P25067 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 ABCC13-202ENST00000463099 3842 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL8A2P25067 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.44□□□□□ -1.7
COL8A2P25067 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL8A2P25067 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.44□□□□□ -1.7
COL8A2P25067 GVINP1-202ENST00000531871 7271 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL8A2P25067 AC092747.4-201ENST00000620519 1861 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 RNA5SP305-201ENST00000362665 119 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.44□□□□□ -1.7
COL8A2P25067 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.44□□□□□ -1.7
COL8A2P25067 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.44□□□□□ -1.7
COL8A2P25067 AL359265.1-201ENST00000440296 795 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.44□□□□□ -1.7
COL8A2P25067 AC073850.1-201ENST00000449243 255 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 OTX2P1-201ENST00000450956 354 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.44□□□□□ -1.7
COL8A2P25067 AC092647.2-201ENST00000452998 253 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 SBDSP1-204ENST00000453858 737 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 AC083899.1-201ENST00000454465 3819 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.44□□□□□ -1.7
COL8A2P25067 AC109462.1-201ENST00000491087 368 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 NPM1P28-201ENST00000492269 840 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 GTF2F2P1-201ENST00000511083 675 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.44□□□□□ -1.7
COL8A2P25067 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 AC012400.1-201ENST00000518452 381 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 OR4A43P-201ENST00000532938 908 ntBASIC4.44□□□□□ -1.7
COL8A2P25067 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.44□□□□□ -1.7
COL8A2P25067 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms