Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH3P22223 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 CASC19-248ENST00000641674 1356 ntBASIC5.46□□□□□ -1.54
CDH3P22223 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH3P22223 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH3P22223 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 Y_RNA.62-201ENST00000362840 99 ntBASIC5.46□□□□□ -1.54
CDH3P22223 RN7SKP74-201ENST00000362849 309 ntBASIC5.46□□□□□ -1.54
CDH3P22223 RNA5SP131-201ENST00000365452 119 ntBASIC5.46□□□□□ -1.54
CDH3P22223 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 AL596448.1-201ENST00000415024 392 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 AC106901.1-201ENST00000425086 698 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH3P22223 Z85994.2-201ENST00000434327 452 ntBASIC5.46□□□□□ -1.54
CDH3P22223 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH3P22223 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH3P22223 RSU1P1-201ENST00000453416 441 ntBASIC5.46□□□□□ -1.54
CDH3P22223 MTND3P4-201ENST00000453537 303 ntBASIC5.46□□□□□ -1.54
CDH3P22223 COX6B1P2-201ENST00000489624 230 ntBASIC5.46□□□□□ -1.54
CDH3P22223 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH3P22223 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH3P22223 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH3P22223 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH3P22223 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH3P22223 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH3P22223 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 MTND2P17-201ENST00000550281 688 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 AC126615.2-201ENST00000553003 515 ntBASIC5.46□□□□□ -1.54
CDH3P22223 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH3P22223 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH3P22223 VN1R81P-201ENST00000602085 372 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AL021368.1-201ENST00000607490 540 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AC012467.1-201ENST00000607740 256 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 AL356752.1-201ENST00000615844 593 ntBASIC5.46□□□□□ -1.54
CDH3P22223 BNIP3P41-202ENST00000616656 861 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AL118508.4-201ENST00000624142 1176 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AC104820.1-201ENST00000624183 307 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 CFTRP2-201ENST00000634304 199 ntBASIC5.46□□□□□ -1.54
CDH3P22223 STX3-208ENST00000641815 3236 ntBASIC5.46□□□□□ -1.54
CDH3P22223 AC104260.2-201ENST00000623551 3497 ntBASIC5.46□□□□□ -1.54
CDH3P22223 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH3P22223 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 AL158152.1-201ENST00000602652 1435 ntBASIC5.46□□□□□ -1.54
CDH3P22223 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH3P22223 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH3P22223 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH3P22223 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 RNA5SP30-201ENST00000365552 115 ntBASIC5.45□□□□□ -1.54
CDH3P22223 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH3P22223 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
CDH3P22223 GAPDHP42-201ENST00000406848 981 ntBASIC5.45□□□□□ -1.54
CDH3P22223 OR3A2-201ENST00000408891 1076 ntBASIC5.45□□□□□ -1.54
CDH3P22223 RN7SKP229-201ENST00000410465 302 ntBASIC5.45□□□□□ -1.54
CDH3P22223 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 AL133173.1-201ENST00000423458 397 ntBASIC5.45□□□□□ -1.54
CDH3P22223 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH3P22223 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH3P22223 CBX1P2-201ENST00000453841 458 ntBASIC5.45□□□□□ -1.54
CDH3P22223 LDHBP2-201ENST00000456969 1005 ntBASIC5.45□□□□□ -1.54
CDH3P22223 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 AC107015.1-201ENST00000466902 747 ntBASIC5.45□□□□□ -1.54
CDH3P22223 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH3P22223 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 EIF4A2P5-201ENST00000529914 499 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms