Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.45□□□□□ -1.54
MSH3P20585 ABCC13-202ENST00000463099 3842 ntBASIC5.45□□□□□ -1.54
MSH3P20585 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH3P20585 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH3P20585 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.45□□□□□ -1.54
MSH3P20585 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.44□□□□□ -1.54
MSH3P20585 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 AP001029.2-203ENST00000589795 4910 ntBASIC5.44□□□□□ -1.54
MSH3P20585 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MSH3P20585 MIR143-201ENST00000385300 106 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AL512422.1-201ENST00000407033 553 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AC012075.1-201ENST00000436549 580 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
MSH3P20585 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.44□□□□□ -1.54
MSH3P20585 AC100832.1-201ENST00000471945 383 ntBASIC5.44□□□□□ -1.54
MSH3P20585 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.44□□□□□ -1.54
MSH3P20585 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 AC093827.1-201ENST00000480094 861 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AC090638.1-201ENST00000498296 909 ntBASIC5.44□□□□□ -1.54
MSH3P20585 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH3P20585 RNU6-467P-201ENST00000517027 110 ntBASIC5.44□□□□□ -1.54
MSH3P20585 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
MSH3P20585 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.44□□□□□ -1.54
MSH3P20585 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.44□□□□□ -1.54
MSH3P20585 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH3P20585 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 AC010547.7-201ENST00000570323 333 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.44□□□□□ -1.54
MSH3P20585 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 AC020915.5-201ENST00000596836 964 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 AC005972.3-201ENST00000606304 481 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AC104307.1-201ENST00000616142 196 ntBASIC5.44□□□□□ -1.54
MSH3P20585 AL049767.1-202ENST00000637826 242 ntBASIC5.44□□□□□ -1.54
MSH3P20585 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH3P20585 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.44□□□□□ -1.54
MSH3P20585 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
MSH3P20585 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH3P20585 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
MSH3P20585 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSH3P20585 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSH3P20585 AC079097.1-201ENST00000512187 1399 ntBASIC5.43□□□□□ -1.54
MSH3P20585 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH3P20585 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.43□□□□□ -1.54
MSH3P20585 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.43□□□□□ -1.54
MSH3P20585 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH3P20585 RNU6-819P-201ENST00000364116 107 ntBASIC5.43□□□□□ -1.54
MSH3P20585 SNORD56.6-201ENST00000384569 71 ntBASIC5.43□□□□□ -1.54
MSH3P20585 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AC079809.1-201ENST00000415468 276 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 CHEK2P5-201ENST00000423877 246 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 AC009784.1-201ENST00000426484 460 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AL121776.1-201ENST00000429337 372 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 NDUFB4P8-201ENST00000435351 367 ntBASIC5.43□□□□□ -1.54
MSH3P20585 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 OR52Y1P-201ENST00000452418 828 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.43□□□□□ -1.54
MSH3P20585 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 RN7SL101P-201ENST00000496350 279 ntBASIC5.43□□□□□ -1.54
MSH3P20585 RPSAP51-201ENST00000497462 645 ntBASIC5.43□□□□□ -1.54
MSH3P20585 SUMO2P4-201ENST00000504193 276 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 AC106872.4-201ENST00000510050 523 ntBASIC5.43□□□□□ -1.54
MSH3P20585 MTND6P2-201ENST00000512226 524 ntBASIC5.43□□□□□ -1.54
MSH3P20585 SNORA70.17-201ENST00000516449 133 ntBASIC5.43□□□□□ -1.54
MSH3P20585 SCARNA16.4-201ENST00000516956 187 ntBASIC5.43□□□□□ -1.54
MSH3P20585 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.43□□□□□ -1.54
MSH3P20585 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH3P20585 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
MSH3P20585 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.43□□□□□ -1.54
MSH3P20585 AC025423.2-201ENST00000537570 439 ntBASIC5.43□□□□□ -1.54
MSH3P20585 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms