Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 AC008429.2-201ENST00000523057 864 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.38□□□□□ -1.23
LIG1P18858 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.38□□□□□ -1.23
LIG1P18858 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.38□□□□□ -1.23
LIG1P18858 AL162632.2-201ENST00000553933 399 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC087465.1-201ENST00000560574 245 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 ANP32BP1-202ENST00000568553 737 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RPL29P33-201ENST00000587474 316 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
LIG1P18858 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 AC245052.7-201ENST00000601161 359 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.38□□□□□ -1.23
LIG1P18858 AC073648.5-201ENST00000603502 305 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC106791.2-201ENST00000604680 391 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC010738.1-201ENST00000604970 987 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC005377.1-201ENST00000605126 456 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC073114.1-201ENST00000612027 490 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC087241.4-201ENST00000612441 480 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL352984.2-202ENST00000613699 155 ntBASIC7.38□□□□□ -1.23
LIG1P18858 OR8G7P-201ENST00000616658 848 ntBASIC7.38□□□□□ -1.23
LIG1P18858 VN1R7P-201ENST00000619242 903 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC211486.4-201ENST00000621495 113 ntBASIC7.38□□□□□ -1.23
LIG1P18858 OR1S1-201ENST00000624470 978 ntBASIC7.38□□□□□ -1.23
LIG1P18858 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 AC019080.5-201ENST00000624891 757 ntBASIC7.38□□□□□ -1.23
LIG1P18858 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
LIG1P18858 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
LIG1P18858 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 AC092111.2-201ENST00000611627 1414 ntBASIC7.37□□□□□ -1.23
LIG1P18858 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.37□□□□□ -1.23
LIG1P18858 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.37□□□□□ -1.23
LIG1P18858 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 LCN1P2-201ENST00000372030 223 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AL034417.1-201ENST00000399343 800 ntBASIC7.37□□□□□ -1.23
LIG1P18858 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.37□□□□□ -1.23
LIG1P18858 RPL12P23-201ENST00000405880 490 ntBASIC7.37□□□□□ -1.23
LIG1P18858 RNU2-17P-201ENST00000410290 190 ntBASIC7.37□□□□□ -1.23
LIG1P18858 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 RPL7P53-201ENST00000421245 739 ntBASIC7.37□□□□□ -1.23
LIG1P18858 PNRC2P1-201ENST00000423940 420 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.37□□□□□ -1.23
LIG1P18858 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 PRUNEP1-201ENST00000425846 705 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AL365220.1-201ENST00000432923 399 ntBASIC7.37□□□□□ -1.23
LIG1P18858 COX7BP2-201ENST00000437976 242 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 CASP3P1-201ENST00000446037 609 ntBASIC7.37□□□□□ -1.23
LIG1P18858 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 AKR1D1P1-201ENST00000457236 936 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC099340.1-201ENST00000475247 599 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC044810.1-201ENST00000480271 711 ntBASIC7.37□□□□□ -1.23
LIG1P18858 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.37□□□□□ -1.23
LIG1P18858 AL390198.2-201ENST00000510553 222 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC119751.1-201ENST00000513357 765 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 RNA5SP318-201ENST00000516352 92 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.37□□□□□ -1.23
LIG1P18858 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 BCAS2P1-201ENST00000528022 632 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.37□□□□□ -1.23
LIG1P18858 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 AC233702.7-202ENST00000582941 211 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 MIR212-201ENST00000586026 110 ntBASIC7.37□□□□□ -1.23
LIG1P18858 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG1P18858 AC125494.2-201ENST00000602431 657 ntBASIC7.37□□□□□ -1.23
LIG1P18858 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC092653.1-201ENST00000608509 531 ntBASIC7.37□□□□□ -1.23
LIG1P18858 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.37□□□□□ -1.23
LIG1P18858 AC069234.5-201ENST00000611056 416 ntBASIC7.37□□□□□ -1.23
LIG1P18858 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
LIG1P18858 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG1P18858 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG1P18858 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms