Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
CSB-PGBD3P0DP91 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 MAPK10-377ENST00000642006 2752 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC119674.1-213ENST00000641177 1386 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 TMSB4XP4-201ENST00000323496 618 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 Y_RNA.6-201ENST00000362350 114 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP346-201ENST00000363541 121 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 Y_RNA.516-201ENST00000384541 124 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC087752.1-201ENST00000391360 558 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC098614.3-201ENST00000438957 440 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 RPL23AP64-201ENST00000469465 435 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC007998.1-201ENST00000474156 672 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 RN7SL714P-201ENST00000487050 298 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC010424.1-201ENST00000506336 297 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC109464.2-201ENST00000510242 943 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP271-201ENST00000516700 88 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC244502.2-201ENST00000543361 851 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 DPPA3P2-202ENST00000557188 1219 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC090695.1-201ENST00000561269 1222 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL512347.1-201ENST00000566420 503 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 EIF1P4-201ENST00000572664 335 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC012417.1-201ENST00000582307 1039 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC022069.1-201ENST00000582910 658 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL157899.1-201ENST00000604110 936 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL163642.2-201ENST00000604722 1019 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC016877.3-201ENST00000606778 504 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC012557.1-201ENST00000607115 611 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL512652.1-201ENST00000619006 500 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC127024.6-201ENST00000621598 424 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC079248.2-201ENST00000623779 326 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC120057.5-201ENST00000623840 154 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC007490.1-201ENST00000624321 703 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AC004520.1-201ENST00000608362 1413 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 NCOA4P2-201ENST00000340589 1813 ntBASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CSB-PGBD3P0DP91 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 MTND5P24-201ENST00000438892 1767 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP284-201ENST00000384547 118 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 SNORD65C-201ENST00000390962 71 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 CBX1P3-201ENST00000413296 527 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 MTND6P12-201ENST00000428247 522 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 BX119917.1-201ENST00000432517 502 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 PA2G4P6-201ENST00000438325 1197 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AL357520.1-201ENST00000441557 453 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 HCG17-214ENST00000453558 732 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AL049870.4-201ENST00000555741 486 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms