Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 ACTR6P1-201ENST00000514311 1104 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC078899.1-201ENST00000521432 1185 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AGGF1P7-201ENST00000562369 913 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 MIMT1-201ENST00000597105 1050 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC012616.1-201ENST00000600294 197 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AL512329.2-201ENST00000607350 548 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 MIR6719-201ENST00000622428 87 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC105105.5-201ENST00000622635 1294 ntBASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAB40ALP0C0E4 AC007938.2-201ENST00000604666 2634 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 PABPC1P6-201ENST00000445594 1829 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 RPS6P23-201ENST00000413224 722 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CRIP1P1-201ENST00000427567 185 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 MTATP6P11-201ENST00000428071 670 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CYCSP12-201ENST00000437729 300 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 RPS15AP29-201ENST00000445539 400 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 DUTP1-201ENST00000493631 470 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC006499.3-201ENST00000506077 748 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 DUX4L52-201ENST00000549363 777 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AL049779.2-201ENST00000553847 315 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC004825.1-201ENST00000555068 586 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC073592.7-201ENST00000623659 507 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 SAMMSON-227ENST00000642114 1199 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC114774.1-201ENST00000507410 1770 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AL161756.3-201ENST00000641216 2071 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 AC083837.1-201ENST00000565297 2994 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.28□□□□□ -1.56
RAB40ALP0C0E4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 AC093671.1-201ENST00000624981 2929 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 PROS2P-201ENST00000474651 1951 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RNA5SP183-201ENST00000362452 119 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RNU1-19P-201ENST00000363306 165 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RN7SKP6-201ENST00000364795 319 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 RNF10P1-201ENST00000418589 369 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 VTI1BP4-201ENST00000427516 527 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 MTND4LP7-201ENST00000431728 294 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 Z99127.2-201ENST00000441426 334 ntBASIC5.27□□□□□ -1.57
RAB40ALP0C0E4 DDX6P1-205ENST00000441966 1436 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms