Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC6P09630 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC6P09630 RNVU1-6-201ENST00000364688 164 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 RPSAP35-201ENST00000413753 818 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 RPL26P29-201ENST00000415623 438 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 HMGB1P32-201ENST00000425971 565 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL590399.2-201ENST00000427536 309 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL360081.1-201ENST00000428299 555 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 USP9YP9-201ENST00000429406 715 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 CEACAMP9-201ENST00000442990 513 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL500527.1-201ENST00000448532 255 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC092647.2-201ENST00000452998 253 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AC097484.1-201ENST00000471148 389 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXC6P09630 RN7SL591P-201ENST00000496150 292 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC6P09630 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 MTND1P36-201ENST00000522384 936 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC6P09630 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC6P09630 AC023389.2-201ENST00000580031 955 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HOXC6P09630 ELOCP28-201ENST00000590044 317 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL391597.1-201ENST00000618707 694 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AP002371.2-201ENST00000624450 503 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 AL356094.1-201ENST00000624663 1212 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC6P09630 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC6P09630 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC6P09630 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC6P09630 RNU1-146P-201ENST00000364015 165 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 U3.10-201ENST00000364459 214 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 CYB5AP4-201ENST00000396692 399 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 SETP10-201ENST00000424368 814 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 IGBP1P3-201ENST00000447449 1000 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 TRY2P-201ENST00000448860 689 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AL513343.1-201ENST00000451818 792 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 GYG1P1-201ENST00000460864 698 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 RPL37AP8-201ENST00000494116 276 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC6P09630 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 AC105420.1-201ENST00000504389 582 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC6P09630 EIF3KP3-201ENST00000514461 639 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC6P09630 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 AP002373.2-201ENST00000541631 1060 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AC137768.1-201ENST00000549998 553 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 MIR4330-201ENST00000579077 105 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 ADAD1P2-201ENST00000588476 646 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC6P09630 AC009597.2-201ENST00000604659 592 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AC093799.2-201ENST00000610062 578 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 AC112694.2-201ENST00000623697 768 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AC069542.2-201ENST00000624816 216 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 HPVC1-201ENST00000629899 1198 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 AL163152.1-201ENST00000642001 374 ntBASIC6.08□□□□□ -1.44
HOXC6P09630 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC6P09630 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC6P09630 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXC6P09630 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC6P09630 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC6P09630 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.07□□□□□ -1.44
HOXC6P09630 AC068870.1-201ENST00000563737 2455 ntBASIC6.07□□□□□ -1.44
HOXC6P09630 AL138820.1-201ENST00000617901 5305 ntBASIC6.07□□□□□ -1.44
HOXC6P09630 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC6P09630 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC6P09630 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms