Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 MIR589-201ENST00000385238 99 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 RPL12P43-201ENST00000420608 499 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.75□□□□□ -1.33
COL5A2P05997 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.75□□□□□ -1.33
COL5A2P05997 RN7SL319P-201ENST00000480656 221 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.75□□□□□ -1.33
COL5A2P05997 RN7SKP122-201ENST00000515923 296 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 AP002981.1-201ENST00000517692 975 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.75□□□□□ -1.33
COL5A2P05997 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.75□□□□□ -1.33
COL5A2P05997 AC098935.2-201ENST00000604222 466 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 AC069542.2-201ENST00000624816 216 ntBASIC6.75□□□□□ -1.33
COL5A2P05997 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
COL5A2P05997 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.75□□□□□ -1.33
COL5A2P05997 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
COL5A2P05997 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.74□□□□□ -1.33
COL5A2P05997 BX510359.2-201ENST00000417920 305 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 AF186996.5-201ENST00000418098 904 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.74□□□□□ -1.33
COL5A2P05997 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.74□□□□□ -1.33
COL5A2P05997 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.74□□□□□ -1.33
COL5A2P05997 AP001880.2-201ENST00000538233 448 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 TOMM20P2-201ENST00000540082 421 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 EIF1P5-201ENST00000585002 234 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
COL5A2P05997 AL031123.3-201ENST00000623345 1837 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL5A2P05997 AC006210.2-201ENST00000367074 1545 ntBASIC6.74□□□□□ -1.33
COL5A2P05997 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.74□□□□□ -1.33
COL5A2P05997 AC079298.1-201ENST00000625026 1619 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.73□□□□□ -1.33
COL5A2P05997 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.73□□□□□ -1.33
COL5A2P05997 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.73□□□□□ -1.33
COL5A2P05997 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.73□□□□□ -1.33
COL5A2P05997 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.73□□□□□ -1.33
COL5A2P05997 AC009643.1-201ENST00000532030 391 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.73□□□□□ -1.33
COL5A2P05997 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
COL5A2P05997 AC011626.1-201ENST00000604710 562 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 AL139124.1-201ENST00000609123 421 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL5A2P05997 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.73□□□□□ -1.33
COL5A2P05997 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.73□□□□□ -1.33
COL5A2P05997 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL5A2P05997 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 AC016745.2-201ENST00000608834 3443 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 BRD7P6-201ENST00000431406 1860 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL5A2P05997 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 DHX40P1-201ENST00000588725 1412 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 AC005225.5-201ENST00000623547 2225 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL5A2P05997 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL5A2P05997 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL5A2P05997 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL5A2P05997 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 TXNP5-201ENST00000441043 315 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.73□□□□□ -1.33
COL5A2P05997 RNA5SP392-201ENST00000516905 112 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.73□□□□□ -1.33
COL5A2P05997 AL445423.1-201ENST00000609941 536 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms