Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL772161.1-201ENST00000439130 476 ntBASIC5.13□□□□□ -1.59
TNFP01375 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.13□□□□□ -1.59
TNFP01375 RN7SL197P-201ENST00000466981 299 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 AC006427.1-201ENST00000514359 712 ntBASIC5.13□□□□□ -1.59
TNFP01375 RN7SKP260-201ENST00000516907 149 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.13□□□□□ -1.59
TNFP01375 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 MIR7853-201ENST00000584820 132 ntBASIC5.13□□□□□ -1.59
TNFP01375 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 AP002884.5-201ENST00000595053 1132 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC024940.4-201ENST00000605507 246 ntBASIC5.13□□□□□ -1.59
TNFP01375 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TNFP01375 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
TNFP01375 MSL3P1-202ENST00000440028 1468 ntBASIC5.13□□□□□ -1.59
TNFP01375 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.13□□□□□ -1.59
TNFP01375 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TNFP01375 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TNFP01375 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TNFP01375 AC083837.1-201ENST00000565297 2994 ntBASIC5.12□□□□□ -1.59
TNFP01375 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
TNFP01375 RNU11-201ENST00000387069 134 ntBASIC5.12□□□□□ -1.59
TNFP01375 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.12□□□□□ -1.59
TNFP01375 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TNFP01375 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.12□□□□□ -1.59
TNFP01375 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TNFP01375 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFP01375 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.12□□□□□ -1.59
TNFP01375 RBMY2QP-201ENST00000429799 1147 ntBASIC5.12□□□□□ -1.59
TNFP01375 AC124944.2-201ENST00000429866 1242 ntBASIC5.12□□□□□ -1.59
TNFP01375 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFP01375 DNAJB5P1-201ENST00000454004 806 ntBASIC5.12□□□□□ -1.59
TNFP01375 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 AP000797.2-201ENST00000475768 606 ntBASIC5.12□□□□□ -1.59
TNFP01375 CR383656.1-201ENST00000484916 377 ntBASIC5.12□□□□□ -1.59
TNFP01375 RPS24P16-201ENST00000497294 392 ntBASIC5.12□□□□□ -1.59
TNFP01375 IGBP1P4-201ENST00000503202 879 ntBASIC5.12□□□□□ -1.59
TNFP01375 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFP01375 AP006245.2-201ENST00000522004 300 ntBASIC5.12□□□□□ -1.59
TNFP01375 AC136777.2-201ENST00000522979 358 ntBASIC5.12□□□□□ -1.59
TNFP01375 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.12□□□□□ -1.59
TNFP01375 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFP01375 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 AL360012.1-201ENST00000602813 131 ntBASIC5.12□□□□□ -1.59
TNFP01375 AC108738.1-201ENST00000603703 237 ntBASIC5.12□□□□□ -1.59
TNFP01375 AC015660.5-201ENST00000623238 564 ntBASIC5.12□□□□□ -1.59
TNFP01375 AL353662.3-201ENST00000625131 237 ntBASIC5.12□□□□□ -1.59
TNFP01375 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.12□□□□□ -1.59
TNFP01375 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.12□□□□□ -1.59
TNFP01375 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TNFP01375 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.12□□□□□ -1.59
TNFP01375 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFP01375 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFP01375 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 EI24P4-201ENST00000423683 1078 ntBASIC5.11□□□□□ -1.59
TNFP01375 AL590399.4-201ENST00000436561 601 ntBASIC5.11□□□□□ -1.59
TNFP01375 PSMD10P3-201ENST00000437000 448 ntBASIC5.11□□□□□ -1.59
TNFP01375 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFP01375 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFP01375 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 RN7SL189P-201ENST00000468631 289 ntBASIC5.11□□□□□ -1.59
TNFP01375 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.11□□□□□ -1.59
TNFP01375 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms