Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 AL590240.1-201ENST00000334118 313 ntBASIC2.22□□□□□ -2.05
USH2AO75445 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 AL139095.1-201ENST00000404326 391 ntBASIC2.22□□□□□ -2.05
USH2AO75445 PPIAP31-201ENST00000405422 495 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 RPL37P1-201ENST00000432310 284 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AL500522.2-201ENST00000448562 343 ntBASIC2.22□□□□□ -2.05
USH2AO75445 PLGLA-201ENST00000465668 449 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC020779.1-201ENST00000478757 796 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 AC006115.2-201ENST00000596823 202 ntBASIC2.22□□□□□ -2.05
USH2AO75445 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.22□□□□□ -2.05
USH2AO75445 RPL34P27-201ENST00000428810 349 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AL137845.2-201ENST00000444292 988 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 OR13C1P-201ENST00000457612 963 ntBASIC2.22□□□□□ -2.05
USH2AO75445 ENPP7P9-201ENST00000514456 627 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC024224.1-201ENST00000538284 609 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 AC039056.2-201ENST00000622261 511 ntBASIC2.22□□□□□ -2.05
USH2AO75445 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
USH2AO75445 RNU1-132P-201ENST00000364300 164 ntBASIC2.22□□□□□ -2.05
USH2AO75445 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 AL122016.1-201ENST00000403365 367 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 CYCSP11-201ENST00000436426 315 ntBASIC2.22□□□□□ -2.05
USH2AO75445 RPL7P28-201ENST00000437739 740 ntBASIC2.22□□□□□ -2.05
USH2AO75445 MRPL35P4-201ENST00000453682 566 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC007967.1-201ENST00000455422 1159 ntBASIC2.22□□□□□ -2.05
USH2AO75445 SLC25A14P1-201ENST00000502867 901 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC108064.1-201ENST00000513791 460 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC137627.1-201ENST00000545761 289 ntBASIC2.22□□□□□ -2.05
USH2AO75445 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 AC105254.2-201ENST00000603636 436 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC012468.1-201ENST00000604888 430 ntBASIC2.22□□□□□ -2.05
USH2AO75445 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 OR56B2P-202ENST00000641377 2453 ntBASIC2.22□□□□□ -2.05
USH2AO75445 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 USP24P1-201ENST00000433802 779 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC2.22□□□□□ -2.05
USH2AO75445 TCEA1P3-201ENST00000443005 880 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC108463.1-201ENST00000450258 347 ntBASIC2.22□□□□□ -2.05
USH2AO75445 HMGB1P4-201ENST00000455362 567 ntBASIC2.22□□□□□ -2.05
USH2AO75445 RPL23AP56-201ENST00000460778 453 ntBASIC2.22□□□□□ -2.05
USH2AO75445 SLC25A51P1-201ENST00000468432 871 ntBASIC2.22□□□□□ -2.05
USH2AO75445 TRBV5-2-201ENST00000489095 273 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC098799.1-201ENST00000504752 800 ntBASIC2.22□□□□□ -2.05
USH2AO75445 Y_RNA.673-201ENST00000516306 88 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AC006210.2-201ENST00000367074 1545 ntBASIC2.22□□□□□ -2.05
USH2AO75445 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 AL359715.3-201ENST00000569267 2123 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms