Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF40O75150 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 RNA5SP483-201ENST00000363431 118 ntBASIC8.26□□□□□ -1.09
RNF40O75150 RNA5SP378-201ENST00000363646 120 ntBASIC8.26□□□□□ -1.09
RNF40O75150 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF40O75150 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 Y_RNA.387-201ENST00000383918 102 ntBASIC8.26□□□□□ -1.09
RNF40O75150 U8.14-201ENST00000390843 143 ntBASIC8.26□□□□□ -1.09
RNF40O75150 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
RNF40O75150 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RNF40O75150 RNA5SP231-201ENST00000410496 138 ntBASIC8.26□□□□□ -1.09
RNF40O75150 Y_RNA.618-201ENST00000410949 107 ntBASIC8.26□□□□□ -1.09
RNF40O75150 RNU6-195P-201ENST00000411352 109 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 AC114482.1-201ENST00000418010 247 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC005033.1-201ENST00000428904 813 ntBASIC8.26□□□□□ -1.09
RNF40O75150 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF40O75150 HMGB3P12-201ENST00000438745 556 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 AC027124.1-201ENST00000440852 466 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AL590365.1-201ENST00000450788 243 ntBASIC8.26□□□□□ -1.09
RNF40O75150 CALM1P2-201ENST00000452941 448 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF40O75150 AC073594.1-201ENST00000462065 364 ntBASIC8.26□□□□□ -1.09
RNF40O75150 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF40O75150 MTND1P3-201ENST00000484956 952 ntBASIC8.26□□□□□ -1.09
RNF40O75150 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 AC114300.1-201ENST00000502347 280 ntBASIC8.26□□□□□ -1.09
RNF40O75150 RNU6-835P-201ENST00000516974 104 ntBASIC8.26□□□□□ -1.09
RNF40O75150 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF40O75150 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF40O75150 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF40O75150 RN7SL14P-201ENST00000579715 298 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC011840.5-201ENST00000582125 771 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC090774.2-201ENST00000584708 322 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 AL391903.2-201ENST00000614532 247 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC068722.2-201ENST00000618734 544 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC092650.2-201ENST00000619984 902 ntBASIC8.26□□□□□ -1.09
RNF40O75150 AC040168.1-201ENST00000623594 991 ntBASIC8.26□□□□□ -1.09
RNF40O75150 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.26□□□□□ -1.09
RNF40O75150 RPL36AP21-202ENST00000639134 430 ntBASIC8.26□□□□□ -1.09
RNF40O75150 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
RNF40O75150 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RNF40O75150 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 AC100810.3-201ENST00000633189 2240 ntBASIC8.25□□□□□ -1.09
RNF40O75150 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.25□□□□□ -1.09
RNF40O75150 Y_RNA.259-201ENST00000364619 101 ntBASIC8.25□□□□□ -1.09
RNF40O75150 SNORA22B-201ENST00000383876 138 ntBASIC8.25□□□□□ -1.09
RNF40O75150 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RNF40O75150 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 AL356967.1-201ENST00000406305 431 ntBASIC8.25□□□□□ -1.09
RNF40O75150 RN7SKP225-201ENST00000410405 352 ntBASIC8.25□□□□□ -1.09
RNF40O75150 RNU6-373P-201ENST00000411247 98 ntBASIC8.25□□□□□ -1.09
RNF40O75150 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 AL022721.1-201ENST00000436521 505 ntBASIC8.25□□□□□ -1.09
RNF40O75150 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 RPL10P6-201ENST00000457497 318 ntBASIC8.25□□□□□ -1.09
RNF40O75150 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 AC112206.1-201ENST00000468416 477 ntBASIC8.25□□□□□ -1.09
RNF40O75150 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 RN7SL124P-201ENST00000498656 285 ntBASIC8.25□□□□□ -1.09
RNF40O75150 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.25□□□□□ -1.09
RNF40O75150 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.25□□□□□ -1.09
RNF40O75150 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 MIR4685-201ENST00000578185 69 ntBASIC8.25□□□□□ -1.09
RNF40O75150 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.25□□□□□ -1.09
RNF40O75150 NRBF2P1-201ENST00000587407 859 ntBASIC8.25□□□□□ -1.09
RNF40O75150 PRELID3BP8-201ENST00000604148 295 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms