Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 AC078878.1-201ENST00000539832 958 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 AL845552.1-201ENST00000556820 323 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.17□□□□□ -1.74
SSSCA1O60232 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.17□□□□□ -1.74
SSSCA1O60232 AC060766.1-201ENST00000590824 627 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 AC024884.1-201ENST00000620583 399 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 AC007204.1-201ENST00000621794 555 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 CASC19-274ENST00000642018 970 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SSSCA1O60232 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.17□□□□□ -1.74
SSSCA1O60232 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.17□□□□□ -1.74
SSSCA1O60232 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
SSSCA1O60232 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSSCA1O60232 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSSCA1O60232 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.16□□□□□ -1.74
SSSCA1O60232 OR8V1P-201ENST00000395193 873 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AL133388.1-201ENST00000404509 287 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 RNA5SP487-201ENST00000410186 122 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AC002524.1-201ENST00000411687 547 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 EIF4A1P1-201ENST00000420241 934 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 PRUNEP1-201ENST00000425846 705 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.16□□□□□ -1.74
SSSCA1O60232 PCNPP2-201ENST00000441651 455 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AC019185.1-201ENST00000442718 389 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 AC105399.1-202ENST00000447303 205 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AP006222.1-205ENST00000450734 457 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 KF459542.1-201ENST00000450908 553 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 SEPT7P3-201ENST00000455017 621 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 AC044810.1-201ENST00000480271 711 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 RPL7P40-201ENST00000481703 745 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 RN7SL346P-201ENST00000491561 294 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.16□□□□□ -1.74
SSSCA1O60232 HNRNPRP2-201ENST00000528421 743 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.16□□□□□ -1.74
SSSCA1O60232 AP001496.3-201ENST00000580230 913 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.16□□□□□ -1.74
SSSCA1O60232 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSSCA1O60232 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSSCA1O60232 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSSCA1O60232 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.15□□□□□ -1.74
SSSCA1O60232 MAPK10-320ENST00000641462 6696 ntBASIC4.15□□□□□ -1.74
SSSCA1O60232 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSSCA1O60232 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSSCA1O60232 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSSCA1O60232 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSSCA1O60232 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.15□□□□□ -1.74
SSSCA1O60232 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSSCA1O60232 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SSSCA1O60232 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 OOSP1-201ENST00000398992 1270 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 OR4K12P-201ENST00000406538 961 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 RNA5SP296-201ENST00000410523 111 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 RN7SKP286-201ENST00000410894 299 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 OR6C64P-201ENST00000419708 825 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.15□□□□□ -1.75
SSSCA1O60232 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 COX6CP13-201ENST00000428703 226 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms