Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTCO2P17-201ENST00000424336 677 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 LYPLA1P1-201ENST00000434514 622 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL512661.1-201ENST00000434586 1253 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AC073410.1-201ENST00000435125 589 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 RNF2P1-201ENST00000442955 1010 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM38O00635 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 OFD1P3Y-201ENST00000453312 783 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TRIM38O00635 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 ST13P12-201ENST00000508958 1094 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AP000648.1-201ENST00000529682 397 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC139697.1-201ENST00000548429 745 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 COX6CP7-201ENST00000597056 208 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC146944.4-201ENST00000602697 718 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL031601.1-201ENST00000605702 394 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 MTND5P11-201ENST00000511037 1812 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 RLIMP2-201ENST00000427891 1563 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM38O00635 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 RNU4-40P-201ENST00000364351 143 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.93□□□□□ -1.46
TRIM38O00635 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 RNU4-27P-201ENST00000410889 139 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 RPL35AP3-201ENST00000414680 288 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL590806.1-201ENST00000415818 853 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL513325.1-201ENST00000417716 1034 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM38O00635 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM38O00635 SUMO2P3-201ENST00000438311 288 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM38O00635 AL645638.1-201ENST00000440519 361 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 RPS27AP2-201ENST00000457576 465 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AC073594.1-201ENST00000462065 364 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 RPL32P14-201ENST00000463196 378 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 RN7SL269P-201ENST00000467795 305 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM38O00635 RPEP1-201ENST00000504507 658 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM38O00635 AC010374.2-201ENST00000512933 535 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM38O00635 AC112198.4-201ENST00000515450 351 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 TMEM97P2-201ENST00000517841 403 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM38O00635 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 PCNAP4-201ENST00000532690 730 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL049870.4-201ENST00000555741 486 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL049779.3-201ENST00000557141 606 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 AC020916.2-201ENST00000591242 360 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 AC005156.1-201ENST00000613371 573 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 AL445528.2-201ENST00000620582 470 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 AP000550.3-201ENST00000637734 379 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 OR8G3P-202ENST00000641572 1255 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 AC232271.1-201ENST00000602455 2715 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM38O00635 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM38O00635 NLRP3P1-201ENST00000622303 1785 ntBASIC5.93□□□□□ -1.46
TRIM38O00635 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TRIM38O00635 NEPNP-201ENST00000404786 1371 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms