Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RN7SL447P-201ENST00000494711 245 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC104109.1-201ENST00000498563 436 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 RPEP1-201ENST00000504507 658 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.96□□□□□ -1.62
UPK1AO00322 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 MIR4310-201ENST00000582950 57 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 AL162431.4-201ENST00000604674 411 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC011626.1-201ENST00000604710 562 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC005840.5-201ENST00000619166 599 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 BX005214.3-202ENST00000619809 325 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.96□□□□□ -1.62
UPK1AO00322 MTCO1P1-201ENST00000624263 1081 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
UPK1AO00322 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 AC133552.1-201ENST00000569988 4007 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 STX3-208ENST00000641815 3236 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UPK1AO00322 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
UPK1AO00322 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 AC006484.1-201ENST00000435086 1884 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UPK1AO00322 RNA5SP132-201ENST00000364725 118 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UPK1AO00322 RNA5SP339-201ENST00000390987 122 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.95□□□□□ -1.62
UPK1AO00322 PCNPP4-201ENST00000414817 517 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 AL133325.1-201ENST00000421090 382 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 OR5M12P-201ENST00000423388 929 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AL389925.1-201ENST00000432257 728 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 CYCSP6-201ENST00000434498 302 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 DNAJB5P1-201ENST00000454004 806 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.95□□□□□ -1.62
UPK1AO00322 AC117394.1-201ENST00000477323 567 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.95□□□□□ -1.62
UPK1AO00322 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.95□□□□□ -1.62
UPK1AO00322 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.95□□□□□ -1.62
UPK1AO00322 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.95□□□□□ -1.62
UPK1AO00322 RNA5SP373-201ENST00000517271 95 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.95□□□□□ -1.62
UPK1AO00322 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.95□□□□□ -1.62
UPK1AO00322 IGKV3D-34-201ENST00000522638 302 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 AC126177.5-201ENST00000549599 178 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 RPL10P14-201ENST00000565265 298 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.95□□□□□ -1.62
UPK1AO00322 WBP1LP8-201ENST00000617401 327 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 AP000648.2-201ENST00000624182 404 ntBASIC4.95□□□□□ -1.62
UPK1AO00322 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPK1AO00322 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.95□□□□□ -1.62
UPK1AO00322 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
UPK1AO00322 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 AC006210.2-201ENST00000367074 1545 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC099654.3-201ENST00000447087 1546 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms