Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 RPS29P10-201ENST00000439197 166 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC092647.2-201ENST00000452998 253 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AL512310.9-201ENST00000553311 948 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AL627230.1-201ENST00000613077 211 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC108359.1-201ENST00000616451 1211 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AL591926.8-201ENST00000616876 211 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 AC026367.3-201ENST00000619032 590 ntBASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NPC1L1Q9UHC9 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 H2AFZP6-201ENST00000444403 394 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AL645937.3-201ENST00000453647 936 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC009127.1-201ENST00000467090 155 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC090114.3-201ENST00000479267 829 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 CDH12P4-201ENST00000517835 295 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 CDH12P3-201ENST00000517935 295 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 CDH12P1-201ENST00000518435 295 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC006116.3-201ENST00000592968 361 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC099494.2-201ENST00000623371 978 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 AC092376.2-201ENST00000622621 4116 ntBASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPC1L1Q9UHC9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NPC1L1Q9UHC9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NPC1L1Q9UHC9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 MIR133A2-201ENST00000347538 102 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 RN7SKP126-201ENST00000411143 300 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 RPL12P9-201ENST00000412942 488 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 OR52E3P-201ENST00000452083 936 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 CASC19-221ENST00000641309 1382 ntBASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPC1L1Q9UHC9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 RN7SKP115-201ENST00000363177 317 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 MIR765-201ENST00000390226 114 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC079809.1-201ENST00000415468 276 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AURKAPS1-201ENST00000451805 1212 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 RN7SL441P-201ENST00000492388 296 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 PRPF19P1-201ENST00000584766 898 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AP002884.5-201ENST00000595053 1132 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC090510.2-201ENST00000617465 629 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms