Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC006600.2-201ENST00000624834 2506 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 RPL23AP27-201ENST00000415161 451 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 RPL34P20-201ENST00000442771 351 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 PSAT1P4-201ENST00000466500 526 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 RPS18P6-201ENST00000476880 458 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC092709.1-201ENST00000521355 1045 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC015720.2-201ENST00000567709 334 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 AP002799.1-201ENST00000623552 423 ntBASIC5.04□□□□□ -1.6
CCDC88CQ9P219 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC88CQ9P219 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC002525.1-201ENST00000624392 1622 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 HSPA8P15-201ENST00000401676 786 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 SLC35E1P1-201ENST00000419313 864 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AL133325.1-201ENST00000421090 382 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 GSTM5P1-201ENST00000434751 660 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC108161.1-201ENST00000461060 402 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC147055.3-201ENST00000510547 851 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 BNIP3P32-201ENST00000600015 554 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AL136295.6-201ENST00000610486 658 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 BX005214.3-202ENST00000619809 325 ntBASIC5.03□□□□□ -1.6
CCDC88CQ9P219 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC88CQ9P219 RN7SKP104-201ENST00000362605 328 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 RN7SKP125-201ENST00000410481 302 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC006455.6-201ENST00000426192 893 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 NPM1P22-201ENST00000427761 952 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 HSPD1P12-201ENST00000429127 1069 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC090804.1-201ENST00000448870 490 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 MIR4646-201ENST00000580775 63 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 MIR4480-201ENST00000582492 71 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 PRPF19P1-201ENST00000584766 898 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC095055.1-201ENST00000603472 1113 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC005899.7-201ENST00000618199 588 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC073136.1-201ENST00000449426 2884 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms