Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.85□□□□□ -1.63
RSPO3Q9BXY4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AL358178.1-201ENST00000407698 397 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AL390774.1-201ENST00000411924 246 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 Z93019.1-201ENST00000416450 973 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 RPL7P6-201ENST00000480903 738 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC020937.1-201ENST00000519677 1013 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC022360.1-201ENST00000521058 340 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC005341.1-201ENST00000571086 708 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AC060766.1-201ENST00000590824 627 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 OR7E18P-201ENST00000592589 702 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AL512624.1-201ENST00000613638 469 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 AL049767.1-202ENST00000637826 242 ntBASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.84□□□□□ -1.63
RSPO3Q9BXY4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.84□□□□□ -1.64
RSPO3Q9BXY4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RSPO3Q9BXY4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RSPO3Q9BXY4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RSPO3Q9BXY4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 OR55B1P-203ENST00000641518 2602 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 U3.3-201ENST00000362986 216 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 RNU1-77P-201ENST00000390868 162 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 RNA5SP339-201ENST00000390987 122 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC013442.1-201ENST00000397347 228 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC211486.3-201ENST00000412694 621 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 BX510359.3-201ENST00000422168 306 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AL163193.1-201ENST00000444895 788 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 EIF1P7-201ENST00000487533 337 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 SUMO2P4-201ENST00000504193 276 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 ATP5LP3-201ENST00000514223 304 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC006427.1-201ENST00000514359 712 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 SUGT1P3-202ENST00000604259 383 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC007204.2-201ENST00000615022 616 ntBASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
RSPO3Q9BXY4 AC093849.1-201ENST00000563631 2209 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms