Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 Y_RNA.693-201ENST00000516641 110 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL512310.1-201ENST00000548639 172 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC044860.2-201ENST00000561005 179 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC026458.1-201ENST00000564330 438 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL589863.1-201ENST00000595383 631 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC243960.4-201ENST00000600532 288 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC093788.1-201ENST00000609356 927 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC103710.1-201ENST00000610003 901 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL355472.4-201ENST00000610233 626 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC138915.3-201ENST00000562908 1389 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 RNA5SP140-201ENST00000364524 92 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MIR498-201ENST00000385134 124 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL122016.1-201ENST00000403365 367 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 RNU2-3P-201ENST00000410144 191 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC073136.2-201ENST00000417282 849 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC092042.2-201ENST00000417304 331 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MRPS21P5-201ENST00000417885 231 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC019050.1-201ENST00000418508 492 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC007435.1-201ENST00000421086 415 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CHCHD3P1-201ENST00000425516 676 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 ETF1P3-201ENST00000430422 1160 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 DEFA9P-201ENST00000433042 285 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PNKDP1-201ENST00000435914 430 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PSPC1P1-201ENST00000442352 665 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 SNRPBP1-201ENST00000443634 282 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 OR52I1-201ENST00000450052 1050 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 RPL23AP35-201ENST00000451906 501 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 NDUFA5P7-201ENST00000452914 242 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 OR13C1P-201ENST00000457612 963 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AP000797.1-201ENST00000478870 387 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MTND1P3-201ENST00000484956 952 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC093270.2-201ENST00000486157 792 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 RN7SL283P-201ENST00000489055 303 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 LSM3P4-201ENST00000502948 309 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 HMGB1P29-201ENST00000505659 499 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC083906.1-201ENST00000509298 406 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PAICSP4-201ENST00000517543 1253 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PSMB7P1-201ENST00000556349 514 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 SNORD95-201ENST00000579879 68 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MIR3663-201ENST00000583207 97 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms