Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKP2Q99959 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.23□□□□□ -1.57
PKP2Q99959 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.23□□□□□ -1.57
PKP2Q99959 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKP2Q99959 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PKP2Q99959 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKP2Q99959 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKP2Q99959 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKP2Q99959 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PKP2Q99959 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.23□□□□□ -1.57
PKP2Q99959 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PKP2Q99959 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 AC093775.1-201ENST00000624154 1868 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 PWAR1-201ENST00000624188 2414 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC093849.1-201ENST00000563631 2209 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PKP2Q99959 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PKP2Q99959 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 RNU6-819P-201ENST00000364116 107 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RNU6-670P-201ENST00000364312 104 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RNU6-1251P-201ENST00000364502 107 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RNU4-7P-201ENST00000364758 141 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.22□□□□□ -1.57
PKP2Q99959 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PKP2Q99959 YWHAZP6-201ENST00000399764 738 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RN7SKP206-201ENST00000410823 293 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 NPM1P40-201ENST00000412758 733 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AC244453.4-201ENST00000419150 388 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 MTCYBP7-201ENST00000419540 1134 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 MAPRE1P3-201ENST00000435438 796 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC016772.1-201ENST00000444170 1261 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 AL596266.1-201ENST00000448132 400 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AC069277.2-201ENST00000454211 432 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 HMGN1P9-201ENST00000515212 298 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RNU6-513P-201ENST00000516104 104 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AC027308.1-201ENST00000517993 110 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC100784.1-201ENST00000522790 310 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.22□□□□□ -1.57
PKP2Q99959 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 AC011445.2-201ENST00000599274 173 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 SNX6P1-201ENST00000601728 1224 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 AF117829.2-201ENST00000619538 361 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.22□□□□□ -1.57
PKP2Q99959 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
PKP2Q99959 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
PKP2Q99959 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PKP2Q99959 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PKP2Q99959 AC022417.1-201ENST00000624768 1303 ntBASIC5.22□□□□□ -1.57
PKP2Q99959 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.21□□□□□ -1.57
PKP2Q99959 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PKP2Q99959 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PKP2Q99959 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.21□□□□□ -1.57
PKP2Q99959 CASC19-281ENST00000642118 1554 ntBASIC5.21□□□□□ -1.57
PKP2Q99959 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKP2Q99959 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.21□□□□□ -1.58
PKP2Q99959 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKP2Q99959 AC104623.2-202ENST00000623477 4002 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PKP2Q99959 SNORD56.6-201ENST00000384569 71 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PKP2Q99959 SNORD65-201ENST00000391079 73 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 AL136131.1-201ENST00000406079 803 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 RNA5SP198-201ENST00000410376 127 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 RNU6-564P-201ENST00000410983 104 ntBASIC5.21□□□□□ -1.58
PKP2Q99959 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.21□□□□□ -1.58
PKP2Q99959 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.21□□□□□ -1.58
PKP2Q99959 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.21□□□□□ -1.58
PKP2Q99959 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms