Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 MTCO1P22-201ENST00000604619 1360 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 DDX18P4-201ENST00000511690 1966 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 RNA5SP500-201ENST00000364486 119 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC017019.1-201ENST00000426129 261 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC006335.2-201ENST00000437993 330 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AL645937.3-201ENST00000453647 936 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 NIP7P2-201ENST00000485801 544 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 IGBP1P4-201ENST00000503202 879 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 GUSBP9-201ENST00000510138 584 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC134698.5-201ENST00000519444 336 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC107918.3-201ENST00000533272 382 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC109583.2-201ENST00000617367 129 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 MIR6823-201ENST00000622118 61 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AL354854.1-201ENST00000455940 1363 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 UGT2B26P-201ENST00000508672 1613 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 AC079298.1-201ENST00000625026 1619 ntBASIC3.98□□□□□ -1.77
AP1S3Q96PC3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP1S3Q96PC3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC007996.1-201ENST00000620414 2821 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RN7SKP257-201ENST00000364525 309 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RN7SKP153-201ENST00000365026 316 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 SNORA68.2-201ENST00000391263 128 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 GCNT1P4-201ENST00000404096 329 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 NFU1P1-201ENST00000413128 774 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 ATP5LP2-201ENST00000440646 311 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 MTND6P5-201ENST00000448266 512 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC090804.1-201ENST00000448870 490 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 PPIAP27-201ENST00000453800 265 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC068228.1-201ENST00000461723 211 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC023194.2-201ENST00000465398 406 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC112206.1-201ENST00000468416 477 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RPS17P15-201ENST00000475609 349 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC087672.1-201ENST00000479876 766 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms