Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC012078.1-201ENST00000405035 1646 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 Z83820.1-201ENST00000456978 1499 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 CASC19-248ENST00000641674 1356 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 EI24P3-201ENST00000399046 1062 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 HSPD1P12-201ENST00000429127 1069 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC012075.1-201ENST00000436549 580 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC016772.1-201ENST00000444170 1261 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC021660.1-201ENST00000465006 554 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC090638.1-201ENST00000498296 909 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MYL12BP2-201ENST00000503948 512 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC109464.1-201ENST00000511091 819 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC092709.1-201ENST00000521355 1045 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 OR8A2P-201ENST00000528631 952 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC068993.1-201ENST00000546724 589 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 OR11H3P-201ENST00000554547 982 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 MTCYBP13-201ENST00000578634 1093 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC010245.2-201ENST00000606908 1167 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC135068.5-201ENST00000624197 983 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MTCO1P7-201ENST00000419523 1542 ntBASIC5.06□□□□□ -1.6
COL21A1Q96P44 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.06□□□□□ -1.6
COL21A1Q96P44 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL21A1Q96P44 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC022417.1-201ENST00000624768 1303 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC019072.1-201ENST00000604535 1551 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AL034549.2-201ENST00000618285 3373 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 OR1L6-202ENST00000373684 1044 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 RN7SKP206-201ENST00000410823 293 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 CHEK2P5-201ENST00000423877 246 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AL121776.1-201ENST00000429337 372 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 RPL19P16-201ENST00000433839 588 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC012512.1-201ENST00000446594 718 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 PPIAP20-201ENST00000449839 135 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC100832.1-201ENST00000471945 383 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 EIF1P7-201ENST00000487533 337 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 RN7SL101P-201ENST00000496350 279 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC011411.1-201ENST00000509592 876 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC106872.4-201ENST00000510050 523 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 MTND6P2-201ENST00000512226 524 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC130364.2-201ENST00000528639 604 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC078878.1-201ENST00000539832 958 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms