Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC015802.2-201ENST00000589690 189 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 MTCO2P22-201ENST00000603246 681 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 RN7SL787P-201ENST00000613000 284 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC125336.1-201ENST00000508893 2827 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 BRAFP1-201ENST00000445336 2703 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AC009962.1-201ENST00000567327 3813 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 RNA5SP500-201ENST00000364486 119 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 RNA5SP284-201ENST00000384547 118 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 MIR323B-201ENST00000385269 82 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 RPS4XP5-201ENST00000419038 768 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 ELOCP6-201ENST00000429066 328 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 MRPL50P1-201ENST00000431951 384 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 RPL23AP19-201ENST00000436229 369 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 SUMO2P3-201ENST00000438311 288 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL161636.2-201ENST00000445179 927 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 FRG2FP-204ENST00000453982 852 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 GEMIN2P1-201ENST00000454246 752 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 ELOCP12-201ENST00000458706 328 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 NPM1P29-201ENST00000483112 803 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 SCARNA18.1-201ENST00000516330 83 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 MIR2117-201ENST00000516780 80 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 ZNF322P1-201ENST00000568013 1209 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL513327.3-201ENST00000602618 469 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL159169.2-201ENST00000610061 1269 ntBASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.92□□□□□ -1.3
CHMP4CQ96CF2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC004158.1-201ENST00000564508 4319 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 MTND5P23-201ENST00000430812 1655 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP81-201ENST00000365603 331 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL672167.2-201ENST00000377164 879 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP29-201ENST00000410957 272 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL035660.1-201ENST00000422041 222 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL512637.2-201ENST00000431287 1256 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 RPL23AP23-201ENST00000452590 471 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 YWHAEP1-201ENST00000453697 763 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 PPIAP19-201ENST00000486414 492 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC034244.2-201ENST00000514668 858 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL512310.9-201ENST00000553311 948 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms