Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC023141.3-201ENST00000436698 278 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 FABP5P3-201ENST00000437960 408 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 MED6P1-201ENST00000439659 713 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 OR10R1P-201ENST00000441524 1141 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC007383.1-201ENST00000445875 636 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 CCRL1P1-201ENST00000449542 1053 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC104629.2-201ENST00000468627 598 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 MTCO3P35-201ENST00000485582 781 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 RN7SL568P-201ENST00000493069 298 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 CR383658.1-201ENST00000514609 734 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 snoU109.5-201ENST00000516231 132 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC136777.2-201ENST00000522979 358 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AL512310.9-201ENST00000553311 948 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 MTCYBP23-201ENST00000558717 1102 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC008088.1-201ENST00000580993 280 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 SNX6P1-201ENST00000601728 1224 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC113368.1-201ENST00000603736 382 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC009779.8-202ENST00000607990 932 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC012676.3-201ENST00000614983 479 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC231759.1-201ENST00000616455 597 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AL035461.2-201ENST00000619201 524 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC019080.5-201ENST00000624891 757 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC083865.1-201ENST00000636634 831 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 LINC01613-201ENST00000561476 2780 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 PSG10P-201ENST00000501199 1500 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AC007382.1-201ENST00000624376 2618 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 AC016745.2-201ENST00000608834 3443 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 PPBPP2-201ENST00000513150 1362 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 ZNF90P1-201ENST00000480493 1951 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC239868.2-201ENST00000564237 4527 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AP000473.2-201ENST00000602659 1537 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ERCC4Q92889 RNFT1P3-201ENST00000340898 1052 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SNORA21-201ENST00000362423 132 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC007068.1-201ENST00000396690 844 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC119751.3-201ENST00000399720 670 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SNRPEP6-201ENST00000407465 277 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SNORA79B-201ENST00000410557 148 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL035422.1-201ENST00000414193 397 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 RPL22P18-201ENST00000417197 377 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 RPL35AP31-201ENST00000418340 337 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC4Q92889 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC4Q92889 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC046176.1-201ENST00000435260 1170 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SNRPFP2-201ENST00000440710 251 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SETD6P1-201ENST00000444575 317 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL627224.1-201ENST00000448334 444 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 BUD31P2-201ENST00000449374 300 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL603882.1-201ENST00000463059 681 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC090602.1-201ENST00000469695 252 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 RN7SL649P-201ENST00000496974 275 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC106822.1-201ENST00000502647 526 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC117522.2-201ENST00000510049 657 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 SNORA74.1-201ENST00000516320 180 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC090424.1-201ENST00000535243 736 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC027455.1-201ENST00000574104 594 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 MTND3P13-201ENST00000574391 343 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms