Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC015802.5-201ENST00000607478 399 ntBASIC5.29□□□□□ -1.56
TM9SF4Q92544 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.29□□□□□ -1.56
TM9SF4Q92544 AC037198.3-201ENST00000616754 526 ntBASIC5.29□□□□□ -1.56
TM9SF4Q92544 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.29□□□□□ -1.56
TM9SF4Q92544 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.29□□□□□ -1.56
TM9SF4Q92544 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TM9SF4Q92544 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 OR51C1P-202ENST00000641159 1444 ntBASIC5.29□□□□□ -1.56
TM9SF4Q92544 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TM9SF4Q92544 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC053481.2-202ENST00000582394 1500 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 LINC01963-201ENST00000562038 3148 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 RN7SKP185-201ENST00000362813 326 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 Y_RNA.110-201ENST00000363220 99 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 SNORA70-201ENST00000384436 135 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL357752.1-201ENST00000412817 349 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 CLUHP1-201ENST00000435012 1190 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 RN7SL197P-201ENST00000466981 299 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 RPL32P33-201ENST00000487023 394 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 GLUD1P3-202ENST00000508551 200 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC044860.2-201ENST00000561005 179 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 DPPA2P4-201ENST00000563717 878 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL163952.1-202ENST00000569625 600 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 MIR1269B-201ENST00000580405 75 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL513327.3-201ENST00000602618 469 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC010245.2-201ENST00000606908 1167 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 SRRM1P3-201ENST00000426911 2678 ntBASIC5.28□□□□□ -1.56
TM9SF4Q92544 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.28□□□□□ -1.56
TM9SF4Q92544 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM9SF4Q92544 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 MIR223-201ENST00000385204 110 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 SPTLC1P2-201ENST00000407089 121 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 MTND2P9-201ENST00000422293 931 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 AL133173.1-201ENST00000423458 397 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 CRIP1P1-201ENST00000427567 185 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 AC012075.1-201ENST00000436549 580 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 RN7SL547P-201ENST00000490793 290 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 CDC42P3-201ENST00000518493 633 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TM9SF4Q92544 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM9SF4Q92544 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.27□□□□□ -1.57
TM9SF4Q92544 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms