Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 NDUFA12P1-201ENST00000455914 406 ntBASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC008147.3-201ENST00000548666 354 ntBASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 MIR3667-201ENST00000581025 74 ntBASIC6.34□□□□□ -1.39
SNED1Q8TER0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SNED1Q8TER0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNED1Q8TER0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.34□□□□□ -1.4
SNED1Q8TER0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.34□□□□□ -1.4
SNED1Q8TER0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 RPL18P10-201ENST00000425606 538 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC112498.1-201ENST00000444401 332 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 TPT1P12-201ENST00000448968 492 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 NDUFA5P9-201ENST00000472609 340 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 RPL23AP72-201ENST00000492447 435 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 GAPDHP56-201ENST00000506031 988 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC006427.1-201ENST00000514359 712 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC012400.1-201ENST00000518452 381 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC034205.1-201ENST00000520621 638 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC136624.4-201ENST00000573044 370 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC105254.2-201ENST00000603636 436 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL132640.2-201ENST00000559968 1698 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL117339.4-201ENST00000608335 7063 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNED1Q8TER0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 FAM3C2-201ENST00000312214 681 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 GLULP6-201ENST00000399502 913 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 COX6CP17-201ENST00000421389 185 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 BX323845.1-201ENST00000432417 179 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 RPL7P40-201ENST00000481703 745 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 RN7SKP260-201ENST00000516907 149 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC068831.8-201ENST00000620171 435 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC135068.12-201ENST00000637370 931 ntBASIC6.33□□□□□ -1.4
SNED1Q8TER0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.33□□□□□ -1.4
SNED1Q8TER0 AL356317.1-201ENST00000396110 1436 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 SNORA62-201ENST00000365493 153 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms