Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC135068.5-201ENST00000624197 983 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC079741.1-201ENST00000321498 212 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NPM1P37-201ENST00000403105 874 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AF186996.5-201ENST00000418098 904 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 RPL7P57-201ENST00000423238 740 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC079168.1-201ENST00000458741 345 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AP005131.7-201ENST00000610087 611 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 KYNUP3-201ENST00000574386 1341 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 ST13P16-201ENST00000401760 781 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AK3P5-201ENST00000432033 519 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 RN7SL604P-201ENST00000492589 296 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 AC093765.1-201ENST00000603758 881 ntBASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ALMS1Q8TCU4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SNORD113.2-201ENST00000364166 89 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RNA5SP428-201ENST00000365129 132 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RPL17P36-201ENST00000420302 549 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SOX5P1-201ENST00000524155 1127 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC009951.1-201ENST00000623674 2614 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SNORA70.4-201ENST00000365509 134 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 GNG5P2-201ENST00000372054 207 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RIMKLBP2-201ENST00000424737 654 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC000111.2-201ENST00000448200 210 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC100757.1-201ENST00000616872 1835 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AL359195.2-201ENST00000623657 4412 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SAMMSON-210ENST00000641260 1308 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 RPL32P23-201ENST00000397237 405 ntBASIC3.49□□□□□ -1.85
ALMS1Q8TCU4 AP002530.1-201ENST00000405705 684 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms