Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC015802.5-201ENST00000607478 399 ntBASIC5.91□□□□□ -1.46
BEST2Q8NFU1 AC092574.1-201ENST00000609771 420 ntBASIC5.91□□□□□ -1.46
BEST2Q8NFU1 AC018445.2-201ENST00000622987 260 ntBASIC5.91□□□□□ -1.46
BEST2Q8NFU1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
BEST2Q8NFU1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC093671.1-201ENST00000624981 2929 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 RNA5SP335-201ENST00000363817 110 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 RN7SKP186-201ENST00000365371 303 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AL354868.1-201ENST00000417077 482 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AJ239321.1-201ENST00000424255 564 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 RPL12P17-201ENST00000432393 498 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 LINC02210-201ENST00000444561 288 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AL672138.1-201ENST00000450604 1015 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC093763.2-201ENST00000505334 1223 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 GLUD1P3-202ENST00000508551 200 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 HMGB1P44-201ENST00000508597 572 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 IGLV2-28-201ENST00000520681 304 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 OR5D2P-201ENST00000524390 911 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 FAM60CP-201ENST00000591086 664 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC005014.3-201ENST00000605985 190 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AL512329.2-201ENST00000607350 548 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC016769.4-201ENST00000616893 535 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 WBP1LP8-201ENST00000617401 327 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 RNA5SP439-201ENST00000617595 124 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC021766.1-201ENST00000624404 741 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC136428.4-201ENST00000634254 1155 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC000095.2-202ENST00000637415 154 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
BEST2Q8NFU1 AC140479.2-201ENST00000421567 3130 ntBASIC5.9□□□□□ -1.46
BEST2Q8NFU1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.9□□□□□ -1.47
BEST2Q8NFU1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
BEST2Q8NFU1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 U3.7-201ENST00000363668 216 ntBASIC5.89□□□□□ -1.47
BEST2Q8NFU1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 RNU2-72P-201ENST00000411175 163 ntBASIC5.89□□□□□ -1.47
BEST2Q8NFU1 DPPA2P3-201ENST00000411853 655 ntBASIC5.89□□□□□ -1.47
BEST2Q8NFU1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.89□□□□□ -1.47
BEST2Q8NFU1 AL133325.1-201ENST00000421090 382 ntBASIC5.89□□□□□ -1.47
BEST2Q8NFU1 RCC2P2-201ENST00000422174 918 ntBASIC5.89□□□□□ -1.47
BEST2Q8NFU1 SRSF1P1-201ENST00000424058 520 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms