Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CFAP43Q8NDM7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFAP43Q8NDM7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 BX284613.1-201ENST00000452221 1641 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC090018.1-201ENST00000434369 367 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AL354714.3-201ENST00000447284 493 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 RN7SKP122-201ENST00000515923 296 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC103792.1-201ENST00000603591 919 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC005377.1-201ENST00000605126 456 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 MIR6839-201ENST00000620425 113 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CFAP43Q8NDM7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 RNA5SP90-201ENST00000364801 99 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 MIR1182-201ENST00000408363 97 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 BX323845.1-201ENST00000432417 179 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 GAPDHP56-201ENST00000506031 988 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AP002981.1-201ENST00000517692 975 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 OR7E128P-201ENST00000532736 1024 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AL034374.2-201ENST00000605281 548 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC100871.1-201ENST00000507871 1456 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 RN7SKP17-201ENST00000411242 351 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 RPS27AP7-201ENST00000422792 455 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC023271.1-201ENST00000445936 1090 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC012512.1-201ENST00000446594 718 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 AL352984.2-202ENST00000613699 155 ntBASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.11□□□□□ -1.11
CFAP43Q8NDM7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 NUDT19P3-201ENST00000404698 555 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 CHIAP3-201ENST00000423668 1133 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 AC090804.1-201ENST00000448870 490 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 AC006967.1-201ENST00000467608 589 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 MIR3160-1-201ENST00000577972 85 ntBASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CFAP43Q8NDM7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AC007559.1-201ENST00000428736 355 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 RPL7AP61-201ENST00000443410 636 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 GLUD1P3-202ENST00000508551 200 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 RNA5SP43-201ENST00000516559 110 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 RN7SKP260-201ENST00000516907 149 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 AC093388.1-201ENST00000609166 430 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms