Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TTC9CQ8N5M4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TTC9CQ8N5M4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TTC9CQ8N5M4 TTC39DP-201ENST00000416781 1688 ntBASIC4.26□□□□□ -1.73
TTC9CQ8N5M4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.26□□□□□ -1.73
TTC9CQ8N5M4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RNU1-146P-201ENST00000364015 165 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RNA5SP241-201ENST00000391326 114 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RNA5SP487-201ENST00000410186 122 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 VN1R3-201ENST00000418822 919 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SRSF1P1-201ENST00000424058 520 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RPS29P14-201ENST00000431518 171 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 GSTM5P1-201ENST00000434751 660 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AL591623.2-201ENST00000449978 222 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC090638.1-201ENST00000498296 909 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC022404.1-201ENST00000555320 273 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AP000769.2-201ENST00000602344 396 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 RNA5SP440-201ENST00000612665 119 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC126175.1-201ENST00000617041 758 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AP003400.3-201ENST00000624904 346 ntBASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC9CQ8N5M4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 THAP12P5-201ENST00000405864 2275 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC003973.3-201ENST00000624863 2822 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 RN7SKP124-201ENST00000364730 341 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AL391422.1-201ENST00000402155 436 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 NAP1L4P2-201ENST00000425958 899 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC002069.1-201ENST00000429649 1159 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC079807.1-201ENST00000429993 481 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AL390119.1-201ENST00000440329 312 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 RN7SL273P-201ENST00000481561 299 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC091544.1-201ENST00000484702 348 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 EIF1P7-201ENST00000487533 337 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 RN7SL346P-201ENST00000491561 294 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC098976.1-201ENST00000513014 541 ntBASIC4.24□□□□□ -1.73
TTC9CQ8N5M4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms