Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC018804.1-201ENST00000430381 618 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 MTND1P28-201ENST00000435623 950 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 OSTCP2-201ENST00000437956 444 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RPS10P14-201ENST00000440748 502 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC093019.1-201ENST00000443135 252 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC013267.1-201ENST00000458227 267 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RPL5P24-201ENST00000463742 885 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RN7SL518P-201ENST00000491887 280 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 SUMO1P1-201ENST00000497904 306 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 HMGN1P12-201ENST00000499125 195 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC021220.1-201ENST00000507445 630 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RPL7L1P7-201ENST00000509986 724 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC010587.2-201ENST00000511727 448 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC008837.2-201ENST00000513076 418 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC022483.1-201ENST00000514020 567 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC010342.1-201ENST00000514047 877 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC096661.1-201ENST00000515870 822 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AP006587.5-201ENST00000532033 739 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC008147.3-201ENST00000548666 354 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC008127.2-201ENST00000549925 1075 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC091932.1-201ENST00000569381 427 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AL161729.3-201ENST00000603533 673 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC007255.2-201ENST00000604053 631 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC124312.5-201ENST00000604451 268 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC245407.2-201ENST00000614199 451 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC005355.2-201ENST00000625064 484 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 LINC01739-205ENST00000641890 573 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC102941.1-201ENST00000567616 1537 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.4
ATG4DQ86TL0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.4
ATG4DQ86TL0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
ATG4DQ86TL0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 AC087392.3-202ENST00000358446 1754 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 AC104162.1-201ENST00000430831 2382 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 RNU12-2P-201ENST00000364789 156 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 Y_RNA.295-201ENST00000364918 102 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 OR1L1-202ENST00000373686 1083 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 RNU6-1227P-201ENST00000383981 107 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 SNORD65C-201ENST00000390962 71 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 HMGB1P10-201ENST00000395823 563 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 RPL5P20-201ENST00000403848 896 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 AL589994.1-201ENST00000404962 340 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ATG4DQ86TL0 RPS15AP38-201ENST00000413110 372 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 SEPT7P8-201ENST00000413308 775 ntBASIC6.27□□□□□ -1.41
ATG4DQ86TL0 RPSAP60-201ENST00000415403 880 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms