Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC109464.1-201ENST00000511091 819 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 SUMO2P19-201ENST00000518920 295 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 OR4A17P-201ENST00000526032 904 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 OR8G3P-201ENST00000533406 921 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AL133406.3-201ENST00000606817 541 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AL139124.1-201ENST00000609123 421 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC009090.3-201ENST00000616553 565 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC112694.2-201ENST00000623697 768 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC005618.4-201ENST00000625053 554 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 OR4G3P-201ENST00000633500 913 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 CASC19-264ENST00000641912 1184 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 AL034549.2-201ENST00000618285 3373 ntBASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BHLHA9Q7RTU4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 Y_RNA.318-201ENST00000365131 97 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 SNORD116-2-201ENST00000384274 95 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 Y_RNA.505-201ENST00000384489 102 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 SNORD116-6-201ENST00000384711 96 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PPIAP9-201ENST00000403866 498 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 MTCO2P1-201ENST00000424648 477 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 DPPA2P1-201ENST00000428060 556 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 NPM1P25-201ENST00000429734 854 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 GSTM5P1-201ENST00000434751 660 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL500527.1-201ENST00000448532 255 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 NDUFA5P8-201ENST00000449019 346 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 CYCSP53-201ENST00000455540 265 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AF213884.2-201ENST00000510417 903 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 RN7SKP99-201ENST00000517028 307 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 RNA5SP373-201ENST00000517271 95 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 IGKV2-19-201ENST00000518132 283 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 DUXAP5-201ENST00000529668 529 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL445435.1-201ENST00000604232 665 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL391834.1-201ENST00000609609 560 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AL603839.4-201ENST00000624658 1005 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC016745.2-201ENST00000608834 3443 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 AC079097.1-201ENST00000512187 1399 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BHLHA9Q7RTU4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
BHLHA9Q7RTU4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHA9Q7RTU4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BHLHA9Q7RTU4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHA9Q7RTU4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms