Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC093827.1-201ENST00000480094 861 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX4Q33E94 RPL37P23-201ENST00000492641 294 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC090638.1-201ENST00000498296 909 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.95□□□□□ -1.62
RFX4Q33E94 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC138938.1-201ENST00000515431 782 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC105031.1-201ENST00000518550 476 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC068305.2-201ENST00000550567 1205 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AL390334.1-201ENST00000556395 450 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC092121.1-201ENST00000569452 202 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC015802.2-201ENST00000589690 189 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC018695.5-201ENST00000605872 315 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AL139407.1-201ENST00000613826 1175 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AP001962.1-201ENST00000624114 559 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC087565.3-203ENST00000641018 837 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFX4Q33E94 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX4Q33E94 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFX4Q33E94 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC023421.1-201ENST00000590535 1785 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
RFX4Q33E94 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC005294.1-201ENST00000355509 281 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC005522.1-201ENST00000395416 346 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 OOSP1-201ENST00000398992 1270 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 RPS3AP2-201ENST00000407190 754 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 RN7SKP286-201ENST00000410894 299 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 RN7SKP97-201ENST00000410966 333 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 SETP15-201ENST00000412724 337 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC245060.4-201ENST00000413293 1121 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 OR6C64P-201ENST00000419708 825 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 OR2AH1P-201ENST00000425717 928 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX4Q33E94 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX4Q33E94 RPL5P22-201ENST00000480199 884 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC111000.5-201ENST00000506559 1178 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC060775.1-201ENST00000518241 520 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC024405.1-201ENST00000532521 1042 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX4Q33E94 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFX4Q33E94 MIR4271-201ENST00000582451 67 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AP000769.2-201ENST00000602344 396 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 AL137246.1-201ENST00000607072 977 ntBASIC4.94□□□□□ -1.62
RFX4Q33E94 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFX4Q33E94 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFX4Q33E94 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFX4Q33E94 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFX4Q33E94 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX4Q33E94 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 SRRM1P3-201ENST00000426911 2678 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 AC006210.2-201ENST00000367074 1545 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFX4Q33E94 MIR375-201ENST00000362103 64 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 RN7SKP275-201ENST00000364626 301 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 RN7SKP6-201ENST00000364795 319 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 MARK2P12-201ENST00000420129 585 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AC066692.1-201ENST00000421721 457 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 OR5M12P-201ENST00000423388 929 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AC113412.1-201ENST00000425840 504 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 PRUNEP1-201ENST00000425846 705 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX4Q33E94 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.93□□□□□ -1.62
RFX4Q33E94 AC005297.1-201ENST00000444765 862 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFX4Q33E94 AP006222.1-205ENST00000450734 457 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AP000547.1-201ENST00000454360 617 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 RPL7P41-201ENST00000485823 957 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms